Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01228 ATGACGAACAAGAAAATGGTGAATGGGGGAACTGTGAACAACTGGATGTGCATCAACTTCTCCCACAATGTGCAAGATAGTACGGCCCGTTGGTTTTGCCATGAGCTTGCACAGCAGTGTCAAGTTTCTGGCATGGCATTCAATCTTGAGCCAGTTCTCCCTCCACGTAATGGATGTCCTGATCAGGTGAAGGTTCTAAAAGCACACTACTGTGATGCCAAAGCTAGACTCGGCGGCAAGGAGCTTGATCTGCTTATTGTTCTATTGCCAGATAATAACAGGAACACGGTGCTTGTTGATGCACTTTCAAGGCAGATACCTTTTATTACTGATCAACCAACTATAATTTTTGGTGCTGATGTTACTCATCCACATCCTGGGGATGATTCTAGTCCTTCCATTGCTGCCGTTGTGGCTTCTCAAGATTGGCCTGAAATTGCAAAGTACGCTGCTTTGGTATGTGCTCAATCTAACAGACAAGAGCCAATTCAAGATTTGTTCAAGAAATGGCAGGACCCTATAAGAGGAGCAATGACTGGCGGCATGATCATGGAACTTCTTAAATCATTCAGAAGGGCTACTGGACGGATGGAGTTGGTCTTCACAAAGATGAACATACTACATGAGATGACAGGCCAAGAAATTGCCGAGACAAAGTCCAAAGTACTCATTCATGTTACTCCAGGAAAAAGACACAGTCTAACAGTAAAACATAACATTCTTGACATTGTCCTTTAG 738 0.4363 MTNKKMVNGGTVNNWMCINFSHNVQDSTARWFCHELAQQCQVSGMAFNLEPVLPPRNGCPDQVKVLKAHYCDAKARLGGKELDLLIVLLPDNNRNTVLVDALSRQIPFITDQPTIIFGADVTHPHPGDDSSPSIAAVVASQDWPEIAKYAALVCAQSNRQEPIQDLFKKWQDPIRGAMTGGMIMELLKSFRRATGRMELVFTKMNILHEMTGQEIAETKSKVLIHVTPGKRHSLTVKHNILDIVL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01228 245 ProSiteProfiles Piwi domain profile. 93 192 IPR003165 GO:0003676
Pte2g01228 245 SUPERFAMILY Ribonuclease H-like 72 197 IPR012337 -
Pte2g01228 245 Gene3D - 2 104 - -
Pte2g01228 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 94 196 - -
Pte2g01228 245 Gene3D - 105 207 IPR036397 GO:0003676
Pte2g01228 245 Pfam Piwi domain 95 196 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01228 Pte-Chr2 13625397 13629401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01228 1 203 Eukaryotic Initiation Factors Gene Family AT1G48410 58.431 1.02e-91 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01228 K11593 - csav:115714148 291.967