Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01227 ATGGTCAGGAAAAGAAGAACTTCTCTTCCAGGTGAGGGTTCGAAGTCTCTGGAAGGTGCAGGTGGTGGGCAGAGTTCCCAAGTTACCATTGAAAGGAGTGGTCCTCCACCTCAGCTGGTGGGCAGAGGCGGTAAAGGAGCGTATCATGGAGGTAGAGGTTGGAATCCACAGGCAAGTACTGGAGGGTATAGTGGAGTTCAGGGCGGTCCATCTGAATATCAAGGCAGGGGTAGATGTTGGGGACCTGAGCAAGGAGGTCATGGAGGTTTCAGTGGCGGTCATGTTGGTGGTGATGTGGGTAGCCGTGGCGTAGGACAATCTGGTGGTCCATCCCGACCTCAACTCCCCGAGCTGCACCACGCTGCACCAGTTCCACATCAAGCTGGGATGATTTCCCAGCCTGCAATTTCGGAGGCAAGTTCTTCGAGAGTACAAGAAGAATCACATCTTGATATTCAGAAGCAAGATGCTTCCGCTCTTGCTATTCCTATCCCATCTTCAAATAAATCTGAGAGGTTTGCCTCAAGACCTGGAAGGGGTAGCAATGGCATCAAATGTGTGGTCAAGGCAAATCATTTTATTGCTGAATTGCCTAACAAAGATCTGCATCAGAATGCTGTAGACATCGAACCAGAGGTTGCTTCACGAGGTGTAAACCGTGCAGTGATGAGCCAGCTGGTCCATTTATATAAGGATTCTCATCTTGCAGGGCGTCAACCTGCTTATGATGGACGAAATATTCTTTATACTGCAGGGCCGCTCCCGTTTCAATCTCAGGAGTTCCAAATCACACTAATTAATGACGATGATAGTTCTGGAGCACAAAGGTTCCACACTCTTTCTGTTTCAACCGAAGAAGGAAAATTGATGGTGGTCATAAAATTTGCTGCACGACGTGATGTACACCACTTAGGACTCTTTTTGCAAGGGAGGCAAACTGATACTCCCCTGGAAGCACTTCAGGCTCTTGACATTGTTTTGCGTGAGGTGCCAACTAAAATTGATGGAAAGAAATGGTATTTCCCTGTAGGTCGTTCATTTTATTTCCATGATCAAGATGAAAGGCAGTCTCTAGGTGAGGGTTTGGAAAGTTGGCGTGGTTTCTATCAAAGTTTTCGTCCAACCCAGATGGGTTTATCTCTCAATATTGATATGTCCTCAACTGCCTTCATTGAAGCCCTGCCTATCGTAGATTTTGTTAACCAGTTACTGAACAGTGATGTTTCTTCCAGACCACTGTCATATGCTGAACATGTGAAGGTCAAGAAAGCTTTGCGTGGTGTCAAGGTTGAAGTCACTCATAGAGGAAACATGCGCAGGAAATACCGTATATCTGGCCTGAGTCCACAGACAACAGGAGAATTGACGTTCCCAGTAGATGAAAGGGGCACAATGAAGTATGTAGTCGACTACTTCCATGATAGATATGATTTTGTTATCCAGCATACTCAGTGGCCTTGTCTTCTAGTGGGAAATCAGCAAAGACCCACTTACTTGCCCATGGAGGAGATGGTTTGCAAGATCGTTAAAGGTCAAAGGTACTCTAAGAGGTTGAATGAGAGGCAGATAACTGCCTTGCTGAAGGTGACCTGCCAACGGCCCCATAAGAGAGAGGAGGATATTTTAAAGGTCTTAACTCCTGACATTGCCCTTGGCTATTTTTAG 1665 0.4637 MVRKRRTSLPGEGSKSLEGAGGGQSSQVTIERSGPPPQLVGRGGKGAYHGGRGWNPQASTGGYSGVQGGPSEYQGRGRCWGPEQGGHGGFSGGHVGGDVGSRGVGQSGGPSRPQLPELHHAAPVPHQAGMISQPAISEASSSRVQEESHLDIQKQDASALAIPIPSSNKSERFASRPGRGSNGIKCVVKANHFIAELPNKDLHQNAVDIEPEVASRGVNRAVMSQLVHLYKDSHLAGRQPAYDGRNILYTAGPLPFQSQEFQITLINDDDSSGAQRFHTLSVSTEEGKLMVVIKFAARRDVHHLGLFLQGRQTDTPLEALQALDIVLREVPTKIDGKKWYFPVGRSFYFHDQDERQSLGEGLESWRGFYQSFRPTQMGLSLNIDMSSTAFIEALPIVDFVNQLLNSDVSSRPLSYAEHVKVKKALRGVKVEVTHRGNMRRKYRISGLSPQTTGELTFPVDERGTMKYVVDYFHDRYDFVIQHTQWPCLLVGNQQRPTYLPMEEMVCKIVKGQRYSKRLNERQITALLKVTCQRPHKREEDILKVLTPDIALGYF* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01227 554 CDD PAZ_argonaute_like 393 509 - -
Pte2g01227 554 Pfam Glycine-rich region of argonaut 68 162 IPR024357 -
Pte2g01227 554 MobiDBLite consensus disorder prediction 1 118 - -
Pte2g01227 554 Pfam PAZ domain 398 525 IPR003100 GO:0005515
Pte2g01227 554 SMART DUF1785_2 341 393 IPR014811 -
Pte2g01227 554 FunFam Protein argonaute-2 387 515 - -
Pte2g01227 554 MobiDBLite consensus disorder prediction 19 33 - -
Pte2g01227 554 Pfam N-terminal domain of argonaute 185 327 IPR032474 -
Pte2g01227 554 SMART PAZ_2_a_3 394 532 IPR003100 GO:0005515
Pte2g01227 554 ProSiteProfiles PAZ domain profile. 394 502 IPR003100 GO:0005515
Pte2g01227 554 SUPERFAMILY PAZ domain 388 545 IPR036085 GO:0005515
Pte2g01227 554 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 163 542 - -
Pte2g01227 554 Gene3D paz domain 387 514 - -
Pte2g01227 554 Pfam Argonaute linker 1 domain 342 392 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01227 Pte-Chr2 13619233 13621883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01227 72 545 Eukaryotic Initiation Factors Gene Family AT1G48410 62.786 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01227 K11593 - csav:115714148 645.58