Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01210 ATGACTTATGATTCTTTAAGGATCATGTTCGCCGTAGAGGATGGGAAACTCCGAGGTGGTCTCGGGGTAAAAAAGCGGCTGAGAGCTGATCTGAAAGCTTCAGCATTGATGAGAGAACGTGGGTTGTGGTTGGATCGTGATAAGAGATTAGTGGGTGCGATACCGGGCATCGAAATTAGCGATTTATTCTTTTTTAGGATGGAAATGTCTGTGATTGGATTGCATGGTCAACCTCAAGCCGGGATTGATTATCTGCCTGCAATTTATAGTTCAAGTGGGGAGCCAATTGCGACTAGTGTTATAGTTTTTGGTGGGTATGAGGATGATGTGGATAGTGGTGATGTGATAATCTATACTGGTAATGGGGGGCAGGATAAACATTCTAGACAATGCTTTCATCAGAAGCTAGAAGGTGGGAATCTTGCGATGGAGCGAAGTATGCATTATGGGATTGAAGTGAGAGTTGTTAGAGGGGTTAAATACCAAGGAAGTCAAACTACTAAGGTGTATGTGTATGATGGCTTATATAGGATCGTTGATTGTTGGTTTGATGTGGGCAAGTCTGGTTTTGGAGTTTACAAGTATAAGCTTTGGAGAATTGAAGGGCAACCTCAAATGGGTAGTGAAAGTCTTAGGACAGCTGCTAGTCTTAAGTCTAGACCATTGGAAGTCAAACCAAAGGGTTACCTTTCTTTGGATATGTCAAACAAAAAGGAAAATGTTCCTGTAAGGGTTTTTAACGATATAGATTCTAACCAGGAGCCTTTGAATTATAATTATGTTTGCCGGACTGCTTTCCCACCATTTGCATTTCATCAAAGTGGGGGTGGAAGTGGATGTAGTTGTCTTTCAAATTGTGGCGATGATTGCTTTTGTGCCTCGAAAAATGGAGGTGAGTTCCCTTATGATCGCAATGGATTCCTCGTGAGAGGGAAACCTGTTGTTTTTGAATGTGGTCCTTACTGTAGTTGTCCTCCACATTGTCGGAACCGGGTTACACATAAGGGGCTTAAAAATAGGTTGGAAGTGTTTTAG 1035 0.4213 MTYDSLRIMFAVEDGKLRGGLGVKKRLRADLKASALMRERGLWLDRDKRLVGAIPGIEISDLFFFRMEMSVIGLHGQPQAGIDYLPAIYSSSGEPIATSVIVFGGYEDDVDSGDVIIYTGNGGQDKHSRQCFHQKLEGGNLAMERSMHYGIEVRVVRGVKYQGSQTTKVYVYDGLYRIVDCWFDVGKSGFGVYKYKLWRIEGQPQMGSESLRTAASLKSRPLEVKPKGYLSLDMSNKKENVPVRVFNDIDSNQEPLNYNYVCRTAFPPFAFHQSGGGSGCSCLSNCGDDCFCASKNGGEFPYDRNGFLVRGKPVVFECGPYCSCPPHCRNRVTHKGLKNRLEVF* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01210 344 SUPERFAMILY PUA domain-like 33 208 IPR015947 -
Pte2g01210 344 ProSiteProfiles Pre-SET domain profile. 278 336 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte2g01210 344 Gene3D SET domain 210 344 IPR046341 -
Pte2g01210 344 SMART G9a_1 47 203 IPR003105 -
Pte2g01210 344 Gene3D - 49 209 IPR036987 -
Pte2g01210 344 Pfam SAD/SRA domain 51 203 IPR003105 -
Pte2g01210 344 SMART preset_2 231 323 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte2g01210 344 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 26 344 - -
Pte2g01210 344 Pfam Pre-SET motif 234 331 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte2g01210 344 SUPERFAMILY SET domain 223 344 IPR046341 -
Pte2g01210 344 ProSiteProfiles YDG domain profile. 52 199 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01210 Pte-Chr2 13374051 13375085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01210 1 344 Su(var)3-9 homologs AT5G04940 41.787 1.74e-78 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01210 K11420 - zju:107422747 524.242