Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01197 ATGGAACAAGATGAACACGAGTTGGATGATGTTCTTCGAAGGGCTTTCGATATGTTCGAGGTTAATAAGGGTTCAGGACTTCAGGATGCTTCACCTCCAAAGTTTTGCAGTGTCCATTCACAGCAAAACTATTCTGGAAATTCAATATTCAGCTGCAAAAACAACGACCTGCATGGGCCTTCCGCAGCTTTTCTTTACACTTGCAATGGTCTGAACAATACTTGCGATGCCTTCCTCATCTTCAAATCACAACCTCCATTCAACTCCATTGCAGCAATTTCAAATCTAACCTCTTCAAGTCCGGAAGAGCTCATTAGGATCAACAAGCTCACGGATTTTCCAACAAATAAAGAGGTCATTGTACCTGTGATATGTTCATGTGATGAGAAGGACTATTACTACCTAGCCAACACCACTTATACCACTAGCAGTTATGATCCATATTACACAATAGCAAATAACACTTATCAGGGATTATCAACTTGCGATTCTCTGAAGCGTGCAAATAATTATGGGGAGCTCGAATTACATCCGGGTTTGCGATTGCATGTGCCACTAAGATGTGCTTGCCCAACAAGGAACCAAACTGCCAGAGGTACCATGTACCTGTTAACATACTCAGTCCATTGGAATGATAAACTTGTTGATATTGCTAGAAGATTCAATATAAGCACACAGAGTCTAATCGACGCCAACGGGTTCTCGTCAGAGAACTCTGTCCTTCACCCCTTCACAACTATTCTCATTCCTCTACCAAATGAACCGTCAGTTTCACTGACAGTGATTCAAAATGAACAGCCAAGCGATTCACCACCACCTGGTTTTTTACATCCCGAAAGCAAAGCAAGAAACAGAAAATCCTACATCAGTATTCCAATTGCAGTCAGTTTTTTGTTACTGTTGGTCTTTGCTGGGATTATAGGTGCTATCCTGATCATTTTCAGGAAGAACCCGGAAGAGGTATTCAAGAAAGGTAGAAAGAAAATTAGCAAGTGGGTCGGGGTTACAAAAAAAGAGATTCGTGTAGAAATAGCGAGCATTGAGCATGTCCAAGTGTACAGATATGAAGAGATAAAGAAAGCTACAGGTAACTTCAACGCCAAGAACAGGTTGCATGATTCTGTATGCATAGGGGTTTTTCACCGAAAAACCATGGTTGTTAAAGAAGAGAACAGAGATGTATCGGTGGAAGTAAGCATGCTGAAGAAGACCAATCATTTCAACCTGACAAAACTCGAAGGTTACTGTGAATATCATGGGTCTCACTTTCTTGTATTTGAGTATATGGAAGGTGGTTCTTTAAGAGAATGGCTCAACAGTAATAGAAGTAATGATCATACAAGCCCGTCCAAGAGGATTGAGATTGCGCTCGATGTTGCCAACGGACTTCACTACCTTCACAACTTCACTGAGCCCCGCTATATCCATAGAAACATTAGCACATGCAATATTTTGCTCAACAGCAATCTGAGGGCGAAGATAGCCAATTTCAGTTTGGTACAACCAATGGACAAGTTTGCTTCGGACACGAAAACTGTTGTGGGAACCAGGGGGTATATAGCACCTGAGTATTTGGAAGTAGGGCTGGTCTCCACCAAGACAGATGTGTATGCGTTTGGAGTGGTTCTGTTGGAACTCATAACAGGCAAAGATCCTATCGTCATACACGATGGGAAAGAGGTGCCACTTCCAGAATTCATAATGTCTTGCTTAGAGAGCAACAAGGAAGAATTAGGACTCGGCTTGTTTATTGATACTAACCTCTTAGAAACAAGTGCAAGAGATTCTGTACTGCCGCTTACAAAGCTCAGTCTTGCGTGCTTGACGCGAGAACCAGATAGGAGACCGAGTATGGAAGAAGTAGTCTCCAGCTTGTCGAAAATCCATATACTTTCATACGGAAATTAA 1908 0.4198 MEQDEHELDDVLRRAFDMFEVNKGSGLQDASPPKFCSVHSQQNYSGNSIFSCKNNDLHGPSAAFLYTCNGLNNTCDAFLIFKSQPPFNSIAAISNLTSSSPEELIRINKLTDFPTNKEVIVPVICSCDEKDYYYLANTTYTTSSYDPYYTIANNTYQGLSTCDSLKRANNYGELELHPGLRLHVPLRCACPTRNQTARGTMYLLTYSVHWNDKLVDIARRFNISTQSLIDANGFSSENSVLHPFTTILIPLPNEPSVSLTVIQNEQPSDSPPPGFLHPESKARNRKSYISIPIAVSFLLLLVFAGIIGAILIIFRKNPEEVFKKGRKKISKWVGVTKKEIRVEIASIEHVQVYRYEEIKKATGNFNAKNRLHDSVCIGVFHRKTMVVKEENRDVSVEVSMLKKTNHFNLTKLEGYCEYHGSHFLVFEYMEGGSLREWLNSNRSNDHTSPSKRIEIALDVANGLHYLHNFTEPRYIHRNISTCNILLNSNLRAKIANFSLVQPMDKFASDTKTVVGTRGYIAPEYLEVGLVSTKTDVYAFGVVLLELITGKDPIVIHDGKEVPLPEFIMSCLESNKEELGLGLFIDTNLLETSARDSVLPLTKLSLACLTREPDRRPSMEEVVSSLSKIHILSYGN* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01197 635 Pfam Protein tyrosine and serine/threonine kinase 372 625 IPR001245 GO:0004672|GO:0006468
Pte2g01197 635 Gene3D Transferase(Phosphotransferase) domain 1 429 632 - -
Pte2g01197 635 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 38 629 - -
Pte2g01197 635 SUPERFAMILY LysM domain 204 250 IPR036779 -
Pte2g01197 635 Gene3D Phosphorylase Kinase; domain 1 335 428 - -
Pte2g01197 635 Gene3D LysM domain 203 250 IPR036779 -
Pte2g01197 635 SUPERFAMILY Protein kinase-like (PK-like) 344 625 IPR011009 -
Pte2g01197 635 ProSiteProfiles LysM domain profile. 204 249 IPR018392 -
Pte2g01197 635 Pfam LysM domain 210 250 IPR018392 -
Pte2g01197 635 ProSiteProfiles Protein kinase domain profile. 338 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01197 635 FunFam PTI1-like tyrosine-protein kinase 3 429 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01197 Pte-Chr2 13253668 13257251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01197 40 628 Receptor kinase-like Gene Family AT2G23770 36.349 2.46e-116 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte2g01197 PK_Tyr_Ser-Thr 2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01197 - - qsa:O6P43_016131 660.603