Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01188 ATGAAGCTGGAGTCTTCTGAAGGAGGCAACTCGGGCATTTGGGGAAGACGAAGAACTGCTCTCTTTGGAGAAGGAGAGGATAGAGCAATTACGCAGCTGATGGGACAGTGTTGGTGGGATACTACAGTCCTAGTGAAAAGGCTATCTACACTTCGTTCTGCAGTGGTACTGACCATTGCACCTTCGACTATACCTCAAGCACTAGCTATCTCCCTGTTCACCAGCTCACACCCAGCAATGGATAACCAATCATCTTTCCCAGACCTCTCCTTACAGATTAGCCCACCGTCTATTTCCTACCACGGAAGAAAGGAAGCAGCAGAAGGAGGATATGTGACAAGAGAAGCGCTTTACAGTGACATGTGCTCTACCTCTGAATCCCTGAGCAGCGGAAGTGATTTAAGCCACGAAAATGGTTCCTTCCAATCGCAGGCTGAGTATTATCATCTTGCACGGACTGAACCACAATTGAGCTTAGGGTTAGATATGGCAGATTTGAATCCCCAAACCGTACAAATGTTACCCAGGACTATCCACCATCACAACTACCAACCTCAAATTTACGGTCGAGCGTTCAAGAGGGGTGCACCGAGGATGATTAATGGAGTGAGAAGAAGCGTCAGAGCTCCCAGAATGAGATGGACTACAACACTTCATGCCCATTTTGTTCATGCAGTCAAGCTTCTCGGAGGACATGAAAGGGCAACACCAAAGTCTGTGTTAGAGTTGATGAATGTGAAGGATTTAACCCTAGCACACGTAAAGAGTCACTTGCAGATGTATAGAACAGTAAAGAGCACAGCTAAGGGACCATCAGGTAATGGGCAGACAGATATGGGTCTCAAACAAAAGGAAGAAAATATTGCCAGTATGGATGCACTACTAAGATCATGGCAGGGATCAGTAGAAACGGACTCATATGGTCAATTATTAAACCCTAACCCAGATATCACCTATTCTCATTCCAAGGCAACTGGGGGCAAGGCGGAAGGATTCAAAGCAAGCATACATGTCTCTCATTGCGTAAATGATAATAGTTTGGAATCCAGCTCCTTGTCGTGTTCGGCTAAGCTGCTTAATCTAGAGTTTACACTTGGAATACCAAGTAGCTAG 1113 0.4573 MKLESSEGGNSGIWGRRRTALFGEGEDRAITQLMGQCWWDTTVLVKRLSTLRSAVVLTIAPSTIPQALAISLFTSSHPAMDNQSSFPDLSLQISPPSISYHGRKEAAEGGYVTREALYSDMCSTSESLSSGSDLSHENGSFQSQAEYYHLARTEPQLSLGLDMADLNPQTVQMLPRTIHHHNYQPQIYGRAFKRGAPRMINGVRRSVRAPRMRWTTTLHAHFVHAVKLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTAKGPSGNGQTDMGLKQKEENIASMDALLRSWQGSVETDSYGQLLNPNPDITYSHSKATGGKAEGFKASIHVSHCVNDNSLESSSLSCSAKLLNLEFTLGIPSS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01188 370 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 87 369 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pte2g01188 370 FunFam Myb family transcription factor 208 266 - -
Pte2g01188 370 Pfam Myb-like DNA-binding domain 211 262 IPR001005 -
Pte2g01188 370 NCBIfam myb-like DNA-binding domain, SHAQKYF class 210 263 IPR006447 GO:0003677
Pte2g01188 370 Gene3D - 209 266 - -
Pte2g01188 370 SUPERFAMILY Homeodomain-like 207 264 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01188 Pte-Chr2 13081447 13084532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01188 72 287 G2-like Transcription Factor Family AT5G42630 51.584 4.00e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte2g01188 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01188 - - pvy:116137755 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01188 2 13081447 13084532 Pte2g01188 2 13081447 13084532 RCT