Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01185 ATGGGGTCTCTACAAAAGGGTGGTGCCGCATGTGTAACTCTTGAAAAAATGCAGACCTCATACTGCTACGTTACATTATTATGTCTGATTCTTTTCTCATCCTTCCATTTTTGCTGTTATGGATTATCCAACTATGAAGCATCTCTCATAGCTCATCGTCAGCTTTTAGCTCTCTCCGAAGGAGGAGATTTACCAGAAAATTATGCAAGTACCTATAAAACTAATCTAACATTTGCCAACTCCAGGCTTAAAAGTGCTTACATTGCTCTGCAAGCATGGAAAAAAGCAATGTATTCAGACCCATTAAACACCACGTCCAATTGGGAGGGTGCAGATGTTTGCTCTTATAAAGGAGTCTTTTGTGCACCAGCTCTAGATGATCCAAAACTACATGTTGTGGCTGGCATTGATCTAAACCATGCAGATATTGCTGGATATCTTCCTGCAGAGTTGGGTTTGTTATCTGATGTAGCCTTGATTCATCTAAACTCAAACAGGTTTTGTGGGATAATTCCAGAAAGCTTTTCCGAGCTCAAACTTCTCTATGAACTTGATCTTAGCAACAATCGTTTTGTTGGTCCTTTCCCCACTGTCATTTTTTCAATCCCACAAATCTATTACCTTGACCTCAGGTTTAATGAATTTGAGGGCAAGTTACCACCTGAGATTTTTGACACAAAGATGGATGCTATATTTTTGAACAATAACCGTTTCTCATCTACCATTCCAGAGAATCTTGGTAGCTCTCCCGCCTCGGTTATTGTTTTTGCCAATAACCATTTCAATGGGTGCATCCCAAATAGCATTGGGAAAATGGCTACATTAAATGAGGTCATTTTCTCAAACAATAGCTTTAGTGGGTGTTTGCCGATTGAACTTCAAACTCTTGGAAACGTGACAATCTTTGATATCACCTCAAATTCATTCACTGGCATTTTACCAAAGACCTTGAGTGGGTTGCGAAACATGGAGGAGTTTGCCATTTCTCACAACATGCTCAAAGGTTTTGTTCCAGATAGTATATGTACCCTTCCAATGTTGAGGAACTTTACATTCTCCTACAACTATTTCAATGGTGAGGGAGATCAATGCAATCCGCGTTCAAGAAAAAACATTGCCTTGGATGATATAAGCAATTGCATACCAGGTAGGCCGACCCAGAAGATAGAGCAAGAATGCAAACCAGTAGTGAGCAAACCAGTTGAGTGCAGCAAAGCTAAATGTGGATGGCCATCTCCACCATTACACTCCAGCCCTCCAGCAGGTACAACTCCAAGAAATCCAACACTGAAGCCAGATACTCCTGATTCGAAGCCGCCTCTAACACCACCAAAGCCAAAATCACCTCCACCTAAGCAACAACCTCCAAAGCCGAACCAACCACCACAGCAACCCAAACTAAGACCTAATCCACCAACAAGCCATAATGTAAAACCAAACCCTCCTCCTTCTCCTACTAATAAGCAACCGTCTCCACCTATAGATGACCCCCATGGTGAATCTTCAATAGTACGTACTAGGTCGCCGCCACGGCCTCCGTCATCACCTGCGCATCAATCTCCGCAACCACCGCCAATTCGCCCACCACCTCCTCCACTAAATCCAGTTCCATCTCCACCACCTCCACCTATGGATGATCCGCACGGTGAATTGCCAATAGAACGTGTTAGGTCCCCACCACCACCATCACCTTTGCATGATCCTAAATATGAGCCTCCCATAAAACATGTTAGGTCCTCACCGCCACCCGCACTTGTCAAATCTCCGCCACCGCCTGTTTACTCCCCACCACCACCTGTTCATTCGCCTCCTCCCCCACCACCTGTTCACTCTCCTCCACCTCCAAAACCGTCGCCTCCACCACCCAGATTGCCACCCCCACCACCTCTCCACTCTCCTCCACCTCCGAGATTGTCACCCCCACCACCTCTCTACTCTCCTCCACCTCCCAGATTATCACCGCCACCACCTGTCCACTCTCCTCCACCTCCCAGATTATCACCGCCACCACCTGTCCACTCTCCACCACCTCCAGTTTATCCTCGTCCATCAGATAACTTCAATCTTCCCCCTATTGTTGGCTCTCAATACCCATCACCACCTCCACCGATTTTCCAAGGCTACTAA 2127 0.4579 MGSLQKGGAACVTLEKMQTSYCYVTLLCLILFSSFHFCCYGLSNYEASLIAHRQLLALSEGGDLPENYASTYKTNLTFANSRLKSAYIALQAWKKAMYSDPLNTTSNWEGADVCSYKGVFCAPALDDPKLHVVAGIDLNHADIAGYLPAELGLLSDVALIHLNSNRFCGIIPESFSELKLLYELDLSNNRFVGPFPTVIFSIPQIYYLDLRFNEFEGKLPPEIFDTKMDAIFLNNNRFSSTIPENLGSSPASVIVFANNHFNGCIPNSIGKMATLNEVIFSNNSFSGCLPIELQTLGNVTIFDITSNSFTGILPKTLSGLRNMEEFAISHNMLKGFVPDSICTLPMLRNFTFSYNYFNGEGDQCNPRSRKNIALDDISNCIPGRPTQKIEQECKPVVSKPVECSKAKCGWPSPPLHSSPPAGTTPRNPTLKPDTPDSKPPLTPPKPKSPPPKQQPPKPNQPPQQPKLRPNPPTSHNVKPNPPPSPTNKQPSPPIDDPHGESSIVRTRSPPRPPSSPAHQSPQPPPIRPPPPPLNPVPSPPPPPMDDPHGELPIERVRSPPPPSPLHDPKYEPPIKHVRSSPPPALVKSPPPPVYSPPPPVHSPPPPPPVHSPPPPKPSPPPPRLPPPPPLHSPPPPRLSPPPPLYSPPPPRLSPPPPVHSPPPPRLSPPPPVHSPPPPVYPRPSDNFNLPPIVGSQYPSPPPPIFQGY* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01185 708 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 35 583 - -
Pte2g01185 708 FunFam Leucine-rich repeat extensin-like protein 1 87 248 - -
Pte2g01185 708 Pfam Leucine rich repeat 298 356 IPR001611 GO:0005515
Pte2g01185 708 MobiDBLite consensus disorder prediction 694 708 - -
Pte2g01185 708 Gene3D Ribonuclease Inhibitor 86 380 IPR032675 -
Pte2g01185 708 MobiDBLite consensus disorder prediction 575 685 - -
Pte2g01185 708 MobiDBLite consensus disorder prediction 509 547 - -
Pte2g01185 708 Pfam Leucine rich repeat N-terminal domain 87 121 IPR013210 -
Pte2g01185 708 MobiDBLite consensus disorder prediction 554 568 - -
Pte2g01185 708 MobiDBLite consensus disorder prediction 432 492 - -
Pte2g01185 708 FunFam Leucine-rich repeat receptor protein kinase EMS1 249 340 - -
Pte2g01185 708 MobiDBLite consensus disorder prediction 406 708 - -
Pte2g01185 708 PRINTS Proline rich extensin signature 428 449 - -
Pte2g01185 708 PRINTS Proline rich extensin signature 481 506 - -
Pte2g01185 708 PRINTS Proline rich extensin signature 411 423 - -
Pte2g01185 708 PRINTS Proline rich extensin signature 449 465 - -
Pte2g01185 708 SUPERFAMILY L domain-like 88 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01185 Pte-Chr2 13004244 13007005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01185 22 409 Trihelix Transcription Factor Family AT3G19020 63.144 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01185 - - twl:119999278 554.288