Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01182 ATGGCTATACGTTTTACCGTCACATACTCCGGGTATGTGGCACAAAATCTGGTCTCCTCGGCCGGGGTCCGAGTGGGAAATTGCCGTGCTTTTCAGGAGTGCTGGATCAGATCGCGGTTTTCGTGTCACCCGCCGAAGCCTGAGGTTGATCACTCCGGGGCTCGCAATTACCACTCGGATTTCCGACCGCCCAGATCGAATTGCTTCGGAAAGAGTTGTACTTCTTTTTATTCAACCGTTGCCCGGGAGGTTCTCGGGAATGATTGCACGAATCCGATCGTTTTGGGTTTGATTTCGATTATGAAGTCAACGGCCGTCGTGTCGGGTTCGTCTGCTACAACCTTGGGTTTATCTGGGATTTCTTCATTTAAAGCCTCTTCGATTATACCCTTTTTACAAGGATCGAAGTGGCTTCCTTGTAACGAATCTTTACCCGGATCTGCCGCTAGTGACGTAGATAAAGGTGGAACTCTCTGCGTCGATGGAGACGAGAGTGAGAGCACAGGGTTCTCTCAGAAGGGTTTTGAAAAGGGCAGCTGGATGTCGCGCCTGTTAGATTGTTGTTCGGAAGACGCGAAGGCTATGTTTACGGCTGTCACTGTTAGTTTGCTTTTTCGTTCGTTCTTGGCTGAACCCAGGTCGATTCCTTCATCTTCTATGTATCCTACTCTGGATGTGGGCGACCGCATTTTAGCCGAGAAGATTTCCTATTTTTTCCGAAAGCCAGATGTCTCAGACATCGTAATATTTAAGGCACCTCCAGTTTTGCAGGAAGTTGGTTATACTTCTAATGATGTTTTCATAAAAAGAGTAGTGGCGAAAGCTGGAGACATTGTAGAAGTTCATGATGGTAAACTATTGATAAATGGTGTTGCTGAAGAGGAAGAGTTTGTCTCAGAGCCACTTGACTATGAGATGGAACCCATGATTGTTCCTGAAGGTTATGTCTTTGTGATGGGAGACAATCGGAATAACAGCTTTGATTCCCATAACTGGGGTCCGCTTCCTGTGAAAAATATCATTGGGAGATCTGTTTTCCGATATTGGCCTCCATCCAAGCCACGTTTCTCTTGCTCCATCCTATCGCAACGGTTGGTTACCTCGATCCAACTGGGTGAAGATGACTCCAGACTCGACTCCAAGTCTGTCTCTGCCCTCCATGATTGCTTCAACAACCTGGGTGATGCAGTAGATGAAATACATGGCTCATTGAAACAAATGCGCCAGCTAGGTGCCGTTGGAACTAGGATCGAGTCGTTCAAGTTTCATATGAGTAATGTGCAGACATGGATGAGTGCCTCTTTGATAGATGAAGAAACTTACACGAACGGGTTTCAGAATGTGCCTGATGGACCTGTGAAGAATGATGTTTGTGAAGGAGTCACTGATCTGAAGAAGTTCACAAGCAATGCTTTAGCTCTGGTGAATACTTACGCTGCTAATAATTGTCACAAATGGTGTTTATGA 1467 0.4615 MAIRFTVTYSGYVAQNLVSSAGVRVGNCRAFQECWIRSRFSCHPPKPEVDHSGARNYHSDFRPPRSNCFGKSCTSFYSTVAREVLGNDCTNPIVLGLISIMKSTAVVSGSSATTLGLSGISSFKASSIIPFLQGSKWLPCNESLPGSAASDVDKGGTLCVDGDESESTGFSQKGFEKGSWMSRLLDCCSEDAKAMFTAVTVSLLFRSFLAEPRSIPSSSMYPTLDVGDRILAEKISYFFRKPDVSDIVIFKAPPVLQEVGYTSNDVFIKRVVAKAGDIVEVHDGKLLINGVAEEEEFVSEPLDYEMEPMIVPEGYVFVMGDNRNNSFDSHNWGPLPVKNIIGRSVFRYWPPSKPRFSCSILSQRLVTSIQLGEDDSRLDSKSVSALHDCFNNLGDAVDEIHGSLKQMRQLGAVGTRIESFKFHMSNVQTWMSASLIDEETYTNGFQNVPDGPVKNDVCEGVTDLKKFTSNALALVNTYAANNCHKWCL* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01182 488 ProSitePatterns Signal peptidases I serine active site. 217 224 IPR019756 GO:0004252|GO:0016020
Pte2g01182 488 PRINTS Bacterial leader peptidase 1 (S26A) family signature 267 279 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte2g01182 488 PRINTS Bacterial leader peptidase 1 (S26A) family signature 311 330 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte2g01182 488 PRINTS Bacterial leader peptidase 1 (S26A) family signature 208 224 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte2g01182 488 PANTHER SIGNAL PEPTIDASE I 158 353 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte2g01182 488 CDD PMEI-like_3 374 480 - -
Pte2g01182 488 Pfam Plant invertase/pectin methylesterase inhibitor 378 474 IPR006501 GO:0004857
Pte2g01182 488 Gene3D Invertase/pectin methylesterase inhibitor family protein 364 478 IPR035513 -
Pte2g01182 488 NCBIfam pectinesterase inhibitor domain 376 478 IPR006501 GO:0004857
Pte2g01182 488 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 376 478 IPR035513 -
Pte2g01182 488 CDD S26_SPase_I 211 343 IPR019533 GO:0004252|GO:0006465
Pte2g01182 488 NCBIfam signal peptidase I 194 350 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte2g01182 488 FunFam Peptidase/ serine-type peptidase 217 348 - -
Pte2g01182 488 ProSitePatterns Signal peptidases I signature 3. 316 329 IPR019758 GO:0004252|GO:0016020
Pte2g01182 488 SUPERFAMILY LexA/Signal peptidase 206 356 IPR036286 -
Pte2g01182 488 Gene3D Umud Fragment, subunit A 205 363 - -
Pte2g01182 488 SMART PMEI_2 336 474 IPR006501 GO:0004857
Pte2g01182 488 Pfam Signal peptidase, peptidase S26 192 349 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01182 Pte-Chr2 12978525 12982955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01182 220 350 MADS-box Gene Family AT1G29960 34.848 7.60e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01182 K03100 - jre:109010298 493.426