Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01178 ATGCTCTGCCGAGTGAACCAAATGAGTCTCAGTCGTGCAACCCCCGGAGTTCTCTTTGTGCTGATCATTGCGTCACTCATGGCAATTGGTGAGGGTAATACCATTGAGGTGGGAGACTCCCAAGGTTGGCGTTTCGGTTTCAACTATACAGACTGGGCTATTCAAAACAGCCCTTTCTACATCGGCGACACACTTGTGTTCAAGTATCCTCCTCCTGGAAAAAGGAACAGCTGGAGTGAGAGTGTTTATTTACTGCCAGACTTATGGAGCTACATAACATGTGATTTCACAAGAGCTAAGCTGTTGGCAGGCCCCAAAGATGGCAGCGGTGGAGGTTTCAAGATTGTGCTTGATCAATGGAGGCCTTACTACTTTGCTTCTGGTGAGCGAAATGGCTATCATTGCGTTGCCGGAAAGATGAAGTTCTTCGCTATCCCATTGCCTTCTTGGCAGTTCTGA 459 0.4793 MLCRVNQMSLSRATPGVLFVLIIASLMAIGEGNTIEVGDSQGWRFGFNYTDWAIQNSPFYIGDTLVFKYPPPGKRNSWSESVYLLPDLWSYITCDFTRAKLLAGPKDGSGGGFKIVLDQWRPYYFASGERNGYHCVAGKMKFFAIPLPSWQF* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01178 152 Gene3D - 31 146 IPR008972 -
Pte2g01178 152 ProSiteProfiles Phytocyanin domain profile. 33 148 IPR003245 GO:0009055
Pte2g01178 152 PANTHER GLYCINE-RICH PROTEIN-LIKE 31 151 - -
Pte2g01178 152 Pfam Plastocyanin-like domain 43 138 IPR003245 GO:0009055
Pte2g01178 152 SUPERFAMILY Cupredoxins 33 145 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01178 Pte-Chr2 12942561 12943521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01178 18 139 Phytocyanin Superfamily AT2G25060 33.858 1.10e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01178 - - fve:101290831 204.912