Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01167 ATGGTTTTCACTCGAACATGTGATGCCACTCGCCTTCTGGCTTTGATGCTTCGGAATCTTGGTCTAAGGGCCATTCCAATTAGTGGTCATATGACCCAGTCAAAAAGACTTGGAGCCTTAAATATGTTCAAGGCTGGGCAGTCTAATATTCTTGTTTGCACTGATGTTGCAAGTAGGGGGCTGGATATTCCTTCAGTTGATATGGTCATCAATTATGATATACCCACAAACTCCAAGGACTACATTCATCGGGTCGGAAGAACTGCACGTGCAGGGCGATCTGGGGTAGCTATCTCTTTGGTGAATCAATATGAGTTGGAGTGGTATATTCAGATAGAGAAGCTTATAGGCAAGAAGTTACCTAAGTTTCCTGCTGAGGAAGAGGAGGTCCTTCAACTCCTGGAGGGTGTCACAGAAGCCAAAAGATTGTCCCTGATGAAAATCAAGCAAATGGGAGGTGAGAAGAAGAGAAGGGGGAAAGAAGATGACGAAGAAGATCTTGACAACTATTTAGGTCTGAAGAACACAGAGTCATACAAGAAATTCAGAAGAAAATGA 558 0.4337 MVFTRTCDATRLLALMLRNLGLRAIPISGHMTQSKRLGALNMFKAGQSNILVCTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPKFPAEEEEVLQLLEGVTEAKRLSLMKIKQMGGEKKRRGKEDDEEDLDNYLGLKNTESYKKFRRK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01167 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 131 IPR027417 -
Pte2g01167 185 Pfam Helicase conserved C-terminal domain 1 92 IPR001650 -
Pte2g01167 185 Gene3D - 1 183 IPR027417 -
Pte2g01167 185 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 1 149 - -
Pte2g01167 185 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 131 IPR001650 -
Pte2g01167 185 SMART helicmild6 11 92 IPR001650 -
Pte2g01167 185 CDD SF2_C_DEAD 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01167 Pte-Chr2 12736304 12737499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01167 1 124 Eukaryotic Initiation Factors Gene Family AT3G19760 35.484 8.83e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01167 K14777 - vvi:100246466 286.574