Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01155 ATGAGTAGTGTACCCAATTCAGGGTCTAACAGCCCTAATGTGATAATTGAAAGAGATCAAGAGGCTGTTGCTGCGGTGGGTCAGAAGCAAAAGAAGGGAAGAGCTCGGACGGATGGCCCAAGGGCTAACGGAGCCAGCAGATTGGACCACAAGATCCACATATGGACCGAAAGAGAGAGAAGGAAGAAGATGAGGCATATGTTCTCCGGTATCCAAGCTTTACTTCCTCAACTTCCTGCTAAGGTAGACAAGTCTACCATAGTGGATGAGACTATAAAGTACATAAAATCGCTTGAAGAAACCCTCCAAACATTGGAGAAGCAGAAGCTGATGGCGGGAATGCTCCCAAGTAGGCCGATCAATGAACTCGACTCAAAAGAAGCATCTTTCGCTGACTATCAATCATCCCATGCGTTTTCAGTTCCAGTAAACATGCATCAGGCATTTCCATTTCCTCCTTCTCCGTCTTGCTTTCAGACTTGGTTTTCGCCAAATGTTGTGTTGACCATTTGCGGGAATGAGGCTCACATCAGTGTTTGTTCTCAGAAGAAACCTGGGCTTCTACCTACCATCTTCTACATTCTACAGAAGCATAAGCTTGATGTTATGTCTGCTCACCTGTCCTCATATCAATGTCGATGCCTTTACATGATCAATGTCCGCGGTGGCAAAGGTTCCAATGGAAATCCTGAATCACTATCATTGGAAGAGTCATTCAAACTTGCTGCATGCGAAATCAACTGGTGGATCTTGACATTGTGA 762 0.4514 MSSVPNSGSNSPNVIIERDQEAVAAVGQKQKKGRARTDGPRANGASRLDHKIHIWTERERRKKMRHMFSGIQALLPQLPAKVDKSTIVDETIKYIKSLEETLQTLEKQKLMAGMLPSRPINELDSKEASFADYQSSHAFSVPVNMHQAFPFPPSPSCFQTWFSPNVVLTICGNEAHISVCSQKKPGLLPTIFYILQKHKLDVMSAHLSSYQCRCLYMINVRGGKGSNGNPESLSLEESFKLAACEINWWILTL* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01155 253 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 20 249 IPR044278 GO:0003700|GO:0006355|GO:0009960
Pte2g01155 253 MobiDBLite consensus disorder prediction 31 45 - -
Pte2g01155 253 MobiDBLite consensus disorder prediction 1 16 - -
Pte2g01155 253 CDD bHLH_AtbHLH_like 53 106 IPR045239 -
Pte2g01155 253 MobiDBLite consensus disorder prediction 1 45 - -
Pte2g01155 253 Coils Coil 88 108 - -
Pte2g01155 253 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 98 IPR011598 GO:0046983
Pte2g01155 253 Gene3D - 47 116 IPR036638 GO:0046983
Pte2g01155 253 SMART finulus 56 104 IPR011598 GO:0046983
Pte2g01155 253 Pfam Helix-loop-helix DNA-binding domain 56 99 IPR011598 GO:0046983
Pte2g01155 253 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 114 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01155 Pte-Chr2 12625225 12626480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01155 31 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 41.964 3.25e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte2g01155 HLH 4.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01155 - - tcc:18591166 249.595