Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01136 ATGGAACCTATTGGAGCTTTCCTTGAAAGTGAGTGGGATTTCCTTAACAAAATGTTTGCAAGCGAAGAGGTTGATTTTATGCCTCAGTTTGCTGCAGGTCATGGTGGTCCAATCTTGTTTGGACAGGGTGAGGAAGTGCATTTGGATATCCACCCAACATTTTGCCCAACATATCAAGCTGACATGAGCATGACAATGGAAAATGAAAATCTATTTTATTCTATAGATGCTTTCATTCCCAACGGTCTCGGTGGTGGAAATGTTTTCGTTGTTAACCCAAGCCATCCTATTTGCCCCTTCAACACTAAGCTGTCGGATAATGTTTCTGTCAATAATAGCAATTGTATGGCCGTGGATATCTCTGTGGATGAGATATACGTTAATTCTTTCAATTCAACGTTGGTTACTGACATTTTGATGGAAGATACTCTTAGCTTGGGTGACAATAGTAATGGTGACACAATGATTATCCCTCAAAACCAAACAGGGCCTTCAGTAAATCCTGGAAATAAAACCAAACTGAAGAGGAAGCTAGAGGTTCAAGACATGCCCGTTCATGCAGAAGGCAAAAGCAAAGCCCCAGTCGAGAGCCAGAAGAAGAAACCTCGTGTTTCTAGAGATGTAAGCCAAGCGCGACGGCCTAAGTGGAACACGCAGCCACAGAAGACGACCCAGAACCAAACTGCGGATGCAAGTGTGGAGGACGAGACTGATTTTCCCCGGACATCAGATTTGCAGAGTTCTAGTAGTTGTAGCGCAGAAGAAGATAATACTTCACATGAAACTAATGGTGTAGTGACTTCATCATCTTCTATTGCCCTGAACTCAAACGGCAAGGCCAGAGCTAGTAGGGGTTCAGCAACTGATCCCCAAAGCCTTTACGCAAGGAGGAGAAGAGAGAGAATCAATGAGAGGCTAAGAATCCTACAAAACCTCGTGCCTAATGGAACAAAGGTCGATATCAGTACAATGCTGGAAGAGGCTGTCCATTACGTTAAATTCTTGCAGCTCCAAATTAAGCTTTTGAGCTCTGATGACCTTTGGATGTACGCTCCGATTGCTTACAATGGAATGGATATCGCTCTCAACCTAAGCAAGAGGCTTTCTTCATCACTATGA 1119 0.4352 MEPIGAFLESEWDFLNKMFASEEVDFMPQFAAGHGGPILFGQGEEVHLDIHPTFCPTYQADMSMTMENENLFYSIDAFIPNGLGGGNVFVVNPSHPICPFNTKLSDNVSVNNSNCMAVDISVDEIYVNSFNSTLVTDILMEDTLSLGDNSNGDTMIIPQNQTGPSVNPGNKTKLKRKLEVQDMPVHAEGKSKAPVESQKKKPRVSRDVSQARRPKWNTQPQKTTQNQTADASVEDETDFPRTSDLQSSSSCSAEEDNTSHETNGVVTSSSSIALNSNGKARASRGSATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIALNLSKRLSSSL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01136 372 FunFam Basic helix-loop-helix transcription factor 287 344 - -
Pte2g01136 372 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 286 351 IPR036638 GO:0046983
Pte2g01136 372 MobiDBLite consensus disorder prediction 242 290 - -
Pte2g01136 372 MobiDBLite consensus disorder prediction 211 233 - -
Pte2g01136 372 MobiDBLite consensus disorder prediction 192 210 - -
Pte2g01136 372 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 170 362 - -
Pte2g01136 372 Pfam Helix-loop-helix DNA-binding domain 296 336 IPR011598 GO:0046983
Pte2g01136 372 MobiDBLite consensus disorder prediction 172 186 - -
Pte2g01136 372 MobiDBLite consensus disorder prediction 151 169 - -
Pte2g01136 372 MobiDBLite consensus disorder prediction 151 297 - -
Pte2g01136 372 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 286 335 IPR011598 GO:0046983
Pte2g01136 372 Gene3D - 288 344 IPR036638 GO:0046983
Pte2g01136 372 SMART finulus 292 341 IPR011598 GO:0046983
Pte2g01136 372 Coils Coil 358 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01136 Pte-Chr2 12347488 12349052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01136 247 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 77.686 1.30e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte2g01136 HLH 1.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01136 - - qsa:O6P43_015996 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01136 2 12347488 12349052 Pte2g01136 2 12347488 12349052 RCT