Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01121 ATGTTCCAATGGTTCCTTCTCACGCACACCTGCGGGAAAAGAAACTTGGTAACACATTTCTTTTCTTTTGACAGATGTGTTGGATCACTTTCCTTTGCAACTCTTGATGCAGAAGAGCTATCAGGTTCTCAGCCTGCCGAAGTTCATAACTTGGTGCAAGGTCAATGGACAAGATCTTCTAACTGGAATACCATTGTGGATCCTTTAAATGGAGAACCATTTATAAAAGTTGCTGATGTCGATGAAAAGGGAATACAGCCGTTTGTTGAGAGCTTATCCAAATGTCCTAAACATGGTCTTCACAACCCCTTTAAAGCACCAGAGAGATATCTATTATATGGAGATATATCTACTAAGGCAGCTCACATGCTTTCACTTCCAAAGGTATCTGATTTCTTCACAAGGTTAATACAAAGGGTTTCGCCAAAGAGTTATCAGCAGGCATATGGTGAAGTTTTTGTCACGCGCAAGTTTCTAGAAAATTTCTGTGGTGATCAGATACATCAAAATGTGCGTTTCCTAGCAAGGTCCTTTGCAGTTCCTGGAAATCATCTTGGACAGCAGAGTCATGGTTTCCGTTGGCCTTATGGTCCGGTGACAATCATTACTCCTTTCAATTTTCCATTAGAGATTCCAGTACTTCAGTTGATGGGTGCATTGTACATGGGCAATAAACCACTTCTTAAAGTTGACAGCAAGGTCAGAGTTGATTCCATTACTGCTATTTTTTACGCTTTCAAGTCAGCATTGTTATGGATCAAATGTTGCGAGTGCTTCATGAATTCTGACGGGAAGGCAATGAACAAGCTACTATTAGAGGCAAATCCACGCATGACTCTTTTCACTGGAAGCTCAAGAGTGGCAGAGAAGTTGGCTGTTGATTTAAAGGGTCATGTAAAACTGGAAGATGCTGGATTTGACTGGAAAATCCTGGGTCCTGATGAAGACTATGTAGCATGGGTATGCGACCAGGATGCGTATGCATGCAGCGGTCAAAAGTGCTCTGCACAATCTTTGTTATTTATGCATGAGGATTGTCACTTCAATTATCAGGACCTTCAATATAACTGGTCCAGTACTTCATTGATATCCAAATTGAAAGAGCTTGCAGAGAGAAGGAAGCTTGAGGACCTCACAATAGGGCCTGATTTGCATCACATCTCTCGCATGTGTCAATTCCAAATATGTATCTATAAATATAATGTGTTTGGATGTGTTTGGTTTTATTGTCCCTTGCAATACACAATACAATCGATTTTGAAACATATGAATCAATTACTTCAGATACCAGGTGCAAAACTACTATTCGTGGGTGAGCCTCTACAAAACCACTTGATTCCACAAGTGTATGGAGCTATAAAGCCGACAGCCATCTTCGTTCCCCTTGAAGAAATGTTGAAGGATAAGAACTACGATCTTGTAACTAGAGAAATATTTGGTCCATTCCAGATCATTACTAAATATAGAAAAGATCAATTGCCAATGGTGTTGGATGCTTTAGAAAGAATGCATGCCCATTTAACCGCTGCCATTGTTTCAAATGATCCCATCTTCATGCAGGAAGTCATTGGAAATACAGTTAGTGGCACTACCTATGCTGGTATAAGAGCTAGGACAATCGGAGCTCCACAAAATCATTGGTTTGGACCAGCTGGTGATCCTAGGGGTGCAGGAATTGGAACCCCAGAAGCTATAAAGCTCGTCTGGTCATGTCACAGAGAGGTAATTTATGATGTGGGGCCTGTGCCAAGCAACTAG 1758 0.4113 MFQWFLLTHTCGKRNLVTHFFSFDRCVGSLSFATLDAEELSGSQPAEVHNLVQGQWTRSSNWNTIVDPLNGEPFIKVADVDEKGIQPFVESLSKCPKHGLHNPFKAPERYLLYGDISTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAYGEVFVTRKFLENFCGDQIHQNVRFLARSFAVPGNHLGQQSHGFRWPYGPVTIITPFNFPLEIPVLQLMGALYMGNKPLLKVDSKVRVDSITAIFYAFKSALLWIKCCECFMNSDGKAMNKLLLEANPRMTLFTGSSRVAEKLAVDLKGHVKLEDAGFDWKILGPDEDYVAWVCDQDAYACSGQKCSAQSLLFMHEDCHFNYQDLQYNWSSTSLISKLKELAERRKLEDLTIGPDLHHISRMCQFQICIYKYNVFGCVWFYCPLQYTIQSILKHMNQLLQIPGAKLLFVGEPLQNHLIPQVYGAIKPTAIFVPLEEMLKDKNYDLVTREIFGPFQIITKYRKDQLPMVLDALERMHAHLTAAIVSNDPIFMQEVIGNTVSGTTYAGIRARTIGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYDVGPVPSN* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01121 585 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 314 534 IPR016163 GO:0016620
Pte2g01121 585 Pfam Aldehyde dehydrogenase family 63 347 IPR015590 GO:0016491
Pte2g01121 585 FunFam probable aldehyde dehydrogenase 41 305 - -
Pte2g01121 585 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 29 578 IPR044638 GO:0004029
Pte2g01121 585 SUPERFAMILY ALDH-like 47 538 IPR016161 GO:0016491
Pte2g01121 585 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Pte2g01121 585 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 41 305 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01121 Pte-Chr2 12180700 12185907 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01121 11 583 Aldehyde Dehydrogenase Gene Family AT5G62530 69.983 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01121 K00294 - qsu:111987570 848.195