Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01120 ATGGAGGATGCATACGCCAGATCCGTCACAGAGGTGTTGGATTTCTTTGGAGTGGATGCGGCCAAAGGACTCACTGATAGTCAGGTCACTCAATATGCTATAGTCTATGGCAAAAATTTACTGCCCGAAGAAAGAAGAGCCCCTTTCTGGAAATTGGTCTTTAAACAGTTCGACGATTTGCTAGTGAAAATATTGATTGCTGCTGCAGTTATATCCTTCATTTTGGCTTTGATTAATGGAGAGACAGGCATTACAGCATTTTTGGAGCCTTCTGTCATTCTAATGATATTGGCTGCCAATGCAACTGTTGGGGTGATTACAGAAACAAATGCCGAAAAGGCTCTCCAGGAACTGCGTGCTTACCAAGCAGATATTGCAACTGTATTGAGAAATGGTTGCTTTTCCATAATTCCTGCAACAGAACTTGTTCCTGGTGATATTGTGGAAGTTTCTGTGGGATGCAAAATTCCAGCTGATATGAGGATGATTGAGATGTTGAGTAACCAGCTACGAGTTGATCAAGCAATTCTAACTGGGGAGAGCTGTTCTGTAGAAAAGGAGCTAGAGTCAACATCGACAACAAATGCAGTATACCAAGACAAAACAAATATTCTCTTTTCGGGAACAGTGGTTGTTTCTGGTCGTGCAAGAGCTGTTGTTGTAGGAGTTGGTGCTAACACTGCCATGGGTAGCATACGAGACTCGATGTTGCACACAGAAGATGAATCAACACCGCTGAAAAAGAAGCTTGATGAGTTTGGAACCTTTTTGGCCAAGGTTATTGCAGGGATTTGCGTCTTAGTCTGGATTGTGAACATTGGCCATTTCCGTGATCCTTCTCATGGGGGTTTCTTGCGTGGTGCCATTCATTACTTCAAGATTGCAGTTGCTCTTGCTGTCGCAGCAATTCCTGAAGGTCTCCCTGCAGTTGTCACAACGTGTTTGGCTCTTGGAACCAAGCGGATGGCTCGGTTGAATGCCATTGTTCGTTCATTGCCATCAGTTGAGACTTTAGGTTGTACTACTGTTATTTGCAGTGATAAAACTGGAACACTTACTACTAATATGATGTCTGTGGCAAAGGTATGTGTCCTTCAGTCAGTACATCTTGGTCCAGTAGTCACTGAGTACAGTGTGAGTGGGACAACATATGCACCAGAAGGGATTATCTTTGACAGCACAGGGATGCAGCTTGAATTGCCGGCCCAACTGCCATGCCTTCTTCACATAGCCATGTGTTCTGCCCTTTGCAATGAATCTGTCTTGCAATATAATCCAGATAAGGGAAATTACGAGAAGATAGGCGAGTCCACTGAAGTGGCCCTTCGGGTTCTAGCAGAAAAGGTTGGTCTTCCCGGTTTTGATTCTATGCCATTTGCTCTGAATATGTTGAGCAAGCATGAACGGGCTTCGTATTGCAATCGTTATTGGATTGAACAATTTAAAAAGATATCTGTTTTGGACTTCTCACGAGATCGCAAAATGATGAGTGTCCTCTGCAGCAGAAATCAGATGCATGTTTTGTTTGCAAAGGGTGCTCCAGAGAGTATAATGTCTAGGTGTAAAACCATCTTGTGCAATGATGATGGTTCCATTGTGCCACTGACACCTGATATCCGAGCTGAGCTGGTCTCAAGATTTGACAGTTTCTCTGGAAAAGATGCATTGAGGTGCTTGGCACTCGCCTTGAAATGGATGCCTTCAAATCAACATGTACTCTCGATTCACGATGAGAATGATCTCACTTTCATTGGGTTGGTCGGGATGCTTGATCCACCAAGAGAGGAAGTTAAAAATGCGATAGTTTCTTGCATGACTGCTGGCATACGTGTTATAGTTGTCACAGGGGATAACAAGTCAACTGCTGAGTCCATTTGCCGCAAGATAGGTGCTTTTGATCACTTAGAAGATTTGTCCAAGCATTCTTTCACTGCTTCTGAGTTTGAACAACTACCACCACTACAGCAATCAATAGCACTACAGCATATGGCACTTCTTACTAGGGTTGAGCCGTCTCATAAGCGGATCCTGGTTGAGGCCTTACAACACCAAAATGAAGTGGTAGCAATGACCGGTGATGGTGTCAATGATGCACCTGCACTGAAAAAGGCTGATATAGGAATTGCTATGGGTTCAGGAACTGCTGTTGCCAAGAGTGCAGCAGATATGGTGCTGGGCAATGACAATTTTGCTTCCATTGTTGCGGCTGTTGCGGAAGGAAGAGCTATATACAATAACACAAAACAATTCATTAGATACATGATTTCTTCAAATATAGGTGAAGTTGTTTGCATATTTGTCGCGGCTGTGCTTGGGATACCTGATACTCTAGCGCCTGTTCAGCTGCTTTGGGTAAACTTGGTGACTGATGGTTTGCCTGCTACTGCTATTGGTTTCAATAAGCAAGATTCAGATGTCATGAAATCTAAACCCCGCTCGGTGAATGAAGCTGTTGTTACAGGATGGCTGTTCTTCCGTTATCTAGTTATCGGAGCTTATGTTGGTCTTGCGACTGTTGCTGGCTTCATATGGTGGTTTGTGTACGCTGATGGTGGCCCTAAACTGCCGTATGGTGAACTGATGAACTTTGATACTTGCCCAACAAGGCAAACTACTTATCCATGCAGTATATTTGAGGATCGGCATCCATCAACCGTGGCGATGACTGTTCTAGTAGTTGTTGAAATGTTCAACGCTTTGAACAATCTTAGTGAAAATCAATCGCTTCTGGTTATACCGCCATGGAGTAATTTATGGCTTGTTGCTTCCATCTTTCTGACCATGCTTCTCCACGTGCTAATTTTGTATGTGCACCCACTTTCTCTTATGTTCTCTGTAAGTAATCTCCTTCATATGTAA 2859 0.4355 MEDAYARSVTEVLDFFGVDAAKGLTDSQVTQYAIVYGKNLLPEERRAPFWKLVFKQFDDLLVKILIAAAVISFILALINGETGITAFLEPSVILMILAANATVGVITETNAEKALQELRAYQADIATVLRNGCFSIIPATELVPGDIVEVSVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELESTSTTNAVYQDKTNILFSGTVVVSGRARAVVVGVGANTAMGSIRDSMLHTEDESTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKVCVLQSVHLGPVVTEYSVSGTTYAPEGIIFDSTGMQLELPAQLPCLLHIAMCSALCNESVLQYNPDKGNYEKIGESTEVALRVLAEKVGLPGFDSMPFALNMLSKHERASYCNRYWIEQFKKISVLDFSRDRKMMSVLCSRNQMHVLFAKGAPESIMSRCKTILCNDDGSIVPLTPDIRAELVSRFDSFSGKDALRCLALALKWMPSNQHVLSIHDENDLTFIGLVGMLDPPREEVKNAIVSCMTAGIRVIVVTGDNKSTAESICRKIGAFDHLEDLSKHSFTASEFEQLPPLQQSIALQHMALLTRVEPSHKRILVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSAADMVLGNDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKSKPRSVNEAVVTGWLFFRYLVIGAYVGLATVAGFIWWFVYADGGPKLPYGELMNFDTCPTRQTTYPCSIFEDRHPSTVAMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIFLTMLLHVLILYVHPLSLMFSVSNLLHM* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01120 952 PANTHER CALCIUM-TRANSPORTING ATPASE 9 942 - -
Pte2g01120 952 NCBIfam calcium-translocating P-type ATPase, SERCA-type 53 847 IPR005782 GO:0005388|GO:0006816|GO:0016020
Pte2g01120 952 FunFam Calcium-transporting ATPase 112 237 - -
Pte2g01120 952 SUPERFAMILY Calcium ATPase, transduction domain A 124 235 IPR008250 -
Pte2g01120 952 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 687 951 - -
Pte2g01120 952 ProSitePatterns E1-E2 ATPases phosphorylation site. 347 353 IPR018303 -
Pte2g01120 952 Coils Coil 111 131 - -
Pte2g01120 952 SUPERFAMILY HAD-like 578 739 IPR036412 -
Pte2g01120 952 Pfam Cation transporter/ATPase, N-terminus 6 72 IPR004014 -
Pte2g01120 952 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 352 589 IPR023299 GO:0000166
Pte2g01120 952 FunFam Calcium-transporting ATPase 355 592 - -
Pte2g01120 952 Gene3D - 55 949 - -
Pte2g01120 952 CDD P-type_ATPase_SERCA 5 949 - -
Pte2g01120 952 FunFam Sodium/potassium-transporting ATPase subunit alpha 584 730 - -
Pte2g01120 952 NCBIfam HAD-IC family P-type ATPase 92 367 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01120 952 NCBIfam HAD-IC family P-type ATPase 661 776 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01120 952 PRINTS P-type cation-transporting ATPase superfamily signature 173 187 - -
Pte2g01120 952 PRINTS P-type cation-transporting ATPase superfamily signature 345 359 - -
Pte2g01120 952 PRINTS P-type cation-transporting ATPase superfamily signature 691 710 - -
Pte2g01120 952 PRINTS P-type cation-transporting ATPase superfamily signature 607 617 - -
Pte2g01120 952 PRINTS P-type cation-transporting ATPase superfamily signature 714 726 - -
Pte2g01120 952 PRINTS P-type cation-transporting ATPase superfamily signature 585 596 - -
Pte2g01120 952 Gene3D - 22 237 - -
Pte2g01120 952 Pfam haloacid dehalogenase-like hydrolase 582 705 - -
Pte2g01120 952 Gene3D - 342 735 IPR023214 -
Pte2g01120 952 SFLD Haloacid Dehalogenase 326 743 - -
Pte2g01120 952 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 947 IPR023298 -
Pte2g01120 952 Pfam Cation transport ATPase (P-type) 415 524 - -
Pte2g01120 952 SMART Cation_ATPase_N_a_2 3 77 IPR004014 -
Pte2g01120 952 Pfam E1-E2 ATPase 122 324 - -
Pte2g01120 952 SFLD p-type atpase 326 743 IPR044492 -
Pte2g01120 952 Pfam Cation transporting ATPase, C-terminus 775 949 IPR006068 -
Pte2g01120 952 Gene3D - 355 592 IPR023299 GO:0000166
Pte2g01120 952 FunFam Calcium-transporting ATPase, putative 211 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01120 Pte-Chr2 12145574 12163414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01120 1 949 Primary Pumps ATPases(2) AT1G10130 82.929 0.0 1627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01120 K05853 - qsa:O6P43_015971 1659.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01120 2 12145574 12163414 Pte2g01120 2 12145574 12163414 RCT