Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01119 ATGTCAAATTTAAATTGTAGCTTGAATGTATTTGCTTTTCTCCTAGCGGCGGTGTCTGTAATGCAAGTTTGCCGTCATCCTTTTGCAAGGGCCCAACAAAGGGTCAAATTCCTTCCTGGCTTTCAGGGGCCCCTTCCTTTTGAACTTGAAACTGGGTACATAGGAGTGGGTGAATCCGATGAGGTACAACTGTATTACTACTTCATCAAGTCTGAGAGCAATCCGCAAAAGGATCCTCTCATACTTTGGCTAACGGGTGGCCCTGGTTGCTCAGGATTCTCAGGGTTAACCATGGAAGTTGGTCCAATTGCCTTCAAGATTGAGGAATACACTGGCAATATACCGAATCTGGTTTTAAGGTCGGACGCATGGACAAAGATAAGCAGCATCATATTTATTGACTCCCCAGTTGGCACAGGCTTCTCTTACTGTAACACTGAGCCACTTTCTGCTCTAATTAGTGACACGAAGCAAGTTCAACATCTTTACCAGTTTGTGAGAAAGTGGTTGATAAATGTTCATCCAGAATTTCTCTCCAATCCCTTTTATGTCGGCGGGGAATCATATTCTGGCATTCCTCTGCCACTCGTTACTCAAGAAATATCAGACGGAAATGAAAGAGGTGTTCTTCCAATAATAAATCTACAGGGATATTTTCTTGGGAATCCCGTTACAGATGGCAAAGAATACAACTATAAAGTCCCATTTGCACATGGAATGGCACTTATCTCCGATGAACTATACAAGTCACTGAAGACAAATTGTAAGGGACAATATCAAATCACAGATGAGACAAACTTATTGTGCTCAAGAGATCTGAAGACATATGAAGAGTTGCTTTCAGACATTACAGTCAACCATGTCTTAGATGCCAAGTGTCAAGTAACTTCTCCACGGCCAAGAGGTCCAAGTGAGGTTTCTTCTAGAAGATATATCTGGGAAGACATTGAGACAGTCCTCACCGGACCTCACCTTTTGCTACCAGCTCAAACCTGTCGGACTTATCCATACTTCTTGTCAGTTTACTGGGCAAACAACGAGAATGTTCGGAAAGCACTTCATGTTAGAGAGGGAAGTGTACCAATTAGCAAATGGATACGCTGCAATTTCAGTATTCCCTATAAGTACGAAGTCCAAAGCACTGTAACGTACCATGCAAATCTCAGTGGGAAAGGCTATCGTTCTTTGATATTTAGTGGCGATCATGACTTAATTGTCCCTTTCATGGCGACTCAGGCATGGATAAGATCCTTGAACTACTCTATCGTTGATGACTGGAGACCATGGTTTGTAGATGGTCAAGTTGCAGGATATACAAGGACTTACGCTAATCGGATGACATTTGCTACTGTAAAGGGTGGTGGACATACACCCCCCGAGTACAAGCCTAAACAATGTTTTGCCATGATGAGAAGATGGTTATCTGGACATCCTTTATAG 1440 0.4264 MSNLNCSLNVFAFLLAAVSVMQVCRHPFARAQQRVKFLPGFQGPLPFELETGYIGVGESDEVQLYYYFIKSESNPQKDPLILWLTGGPGCSGFSGLTMEVGPIAFKIEEYTGNIPNLVLRSDAWTKISSIIFIDSPVGTGFSYCNTEPLSALISDTKQVQHLYQFVRKWLINVHPEFLSNPFYVGGESYSGIPLPLVTQEISDGNERGVLPIINLQGYFLGNPVTDGKEYNYKVPFAHGMALISDELYKSLKTNCKGQYQITDETNLLCSRDLKTYEELLSDITVNHVLDAKCQVTSPRPRGPSEVSSRRYIWEDIETVLTGPHLLLPAQTCRTYPYFLSVYWANNENVRKALHVREGSVPISKWIRCNFSIPYKYEVQSTVTYHANLSGKGYRSLIFSGDHDLIVPFMATQAWIRSLNYSIVDDWRPWFVDGQVAGYTRTYANRMTFATVKGGGHTPPEYKPKQCFAMMRRWLSGHPL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01119 479 Pfam Serine carboxypeptidase 39 476 IPR001563 GO:0004185|GO:0006508
Pte2g01119 479 SUPERFAMILY alpha/beta-Hydrolases 35 478 IPR029058 -
Pte2g01119 479 FunFam Serine carboxypeptidase-like 11 29 479 - -
Pte2g01119 479 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 463 IPR001563 GO:0004185|GO:0006508
Pte2g01119 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Pte2g01119 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Pte2g01119 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Pte2g01119 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Pte2g01119 479 FunFam Carboxypeptidase 331 478 - -
Pte2g01119 479 Gene3D alpha/beta hydrolase 34 478 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01119 Pte-Chr2 12122924 12128543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01119 25 58 Calmodulin-binding Proteins AT2G22960 67.647 1.38e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01119 K16296 - qsa:O6P43_015968 586.645