Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01113 ATGTTTTCCGAGGAAGATGTAGTTCCCTTTTTATGTCCATCTTTAGAAACGGGTCTCTCAGGGAGTGAGATACAAGAACGGTTTTCCCTCATTAAGTCGAATCAACCGCTCATTTCAAACTCCGGTTCGCAGAGGTCTAACCGGGCGGTATACTCGGTGGACGAAAGAAAACGTAGACGTATGGTATCAAACCGCGAGTCGGCCAGACGCTCCCGCTGGAGGAAGAAGAGGCATTTGGAGAACCTCACGGACCAGTTGAACCGGTTGAAAACTGAGAACCGAGTGCTGCAAGAGCGATTGAACCCGATGTTGAGCCGTTGTATCTTGATTCGTGGTGAAAATGTACGGTTAACGTTGGAATCTTTTGCCCTGTTCGCTAAGCTATCCAATCTATACATTCTTCTACGCTCCGACGAACATGCATGCAATGTATCCAATAAGCCTTAA 447 0.472 MFSEEDVVPFLCPSLETGLSGSEIQERFSLIKSNQPLISNSGSQRSNRAVYSVDERKRRRMVSNRESARRSRWRKKRHLENLTDQLNRLKTENRVLQERLNPMLSRCILIRGENVRLTLESFALFAKLSNLYILLRSDEHACNVSNKP* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01113 148 SUPERFAMILY Leucine zipper domain 56 110 IPR046347 GO:0003700|GO:0006355
Pte2g01113 148 FunFam BZIP transcription factor 54 105 - -
Pte2g01113 148 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 54 103 IPR004827 GO:0003700|GO:0006355
Pte2g01113 148 Coils Coil 72 99 - -
Pte2g01113 148 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 59 74 IPR004827 GO:0003700|GO:0006355
Pte2g01113 148 Gene3D - 54 107 - -
Pte2g01113 148 Pfam bZIP transcription factor 56 102 IPR004827 GO:0003700|GO:0006355
Pte2g01113 148 SMART brlzneu 52 116 IPR004827 GO:0003700|GO:0006355
Pte2g01113 148 CDD bZIP_plant_GBF1 57 107 IPR045314 GO:0003700|GO:0006355
Pte2g01113 148 PANTHER BZIP TRANSCRIPTION FACTOR 44 40 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01113 Pte-Chr2 12089636 12090583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01113 3 131 bZIP Transcription Factor Family AT3G49760 35.252 1.28e-17 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte2g01113 bZIP_1 6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01113 - - ghi:107917126 142.895