Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01112 ATGGATTTTGGGGTGGTGGGAGTAGATGGGGTGGTCGGTTCAGACATTGGTTTTGGTTCTCTTGCTTCAGATAATCAGACAAAACCGAAATGGTACGGATCTGGATCACTTAAGCAGGAGGGGTCTGGCAACACCGAAGGTGACTGGAGAAGCACAAAACTGGCCAAAACAGATGATTTCTCTACCTCCAAAGCCATGCTGCTTCATCAGCAGAGGAACGCTGCTGCACTAAGATCTAACGCCTCTGTGTTCTTTGATGGTCAGCAACAACAACATATGCTGAGCTTTTCTTCTCCAAAACCAGAAGTGCTTTTAGTAGACAAGAACTCCCAGAATGCTGCATTGCCTTATTCTTACCAATCAGTATCCCCTTGCACTAGAACAACAGGCTACAGTTCTGCAAGTTTAAATGGTGCAAGCATGCATGGAGTTCTGTCTGGGCCGAGGGGACCATTCACTCCTTCTCAGTGGATTGAGCTGGAACACCAAGCCTTGATCTACAAGTACTTCACTGCAGACGTGCCTGTACCTTCAAATCTGCTTGTCCCCATCAAGAAAGCGCTTGAGTCGACTGGTGTCTGTAGCTACTCAGGCGGACTTCTGAGGCCCAATTCATTGGGATGGGGATCTTTTCATCTGGGATTCTCGAGCAACGCCGATCCCGAGCCAGGAAGGTGTCGTAGAACAGATGGAAAGAAATGGCGGTGTTCCAGAGATGCCGTTCCTGATCAGAAATACTGTGAGCGACATATGAATAGGGGCCGCCATCGTTCAAGAAAGCATGTGGAAGGCCAATCAGGCCATGCCGTCACTGCAACTACCACCACCACCTCAAAACTTTTGCCAAATACTTCTTCCTCACATATGTCAACGATGATAGACGGTGGATCCAGCGACATCACCTTTGCACGGCAGGCGCCAAGTGAACCGCATAAAGGGTCTGTGCCAGGCAGCACGAATGGGCTTTTTGTGAGTAGCAAACTGAATGCAAGTGAGAAAAAGCAAGATACTCCATCATTGTCCATGTTTTCTTCAGCCATGGAACTGAAATCTAAGGGAAATTCATTTTTGATTAATGAATCTCAGTACCCATGTGAAGAATCCTCAAGGACTCAGTTCGGGCTTGTGACTTCAGAATCTTTACTTAACCCTTCACAAAAAGAGACACCACAATCCATTAGGTATTTCATTGACGACTGGCCCAAGAATCCGTCTGATCGCTGCAGTCTTTCATGGCAGGATGTAGACACACAGACAGAGAGGACTCAACTATCCATTTCAATCCCAATGCCTCCCTCTGATTTCTCGAAATCCATTTCCACTGCCTCCAATGAGCAACTCAAACTCTCATCTCTTAGGCATTCCTGCGAGTTAGAACCAATGCACGAGGGTTTAGGATTGGGAAGCAGCAATGTTGTTGTAAGTGAATCATGCAACACTAGCCAAGCGAATTGGATCCCAATTAGGTGGGAGAGTTCAATGGGAGGTCCTCTGGGTGAGGCTCTGCAGCATAGTAATAATGGAAATGAGTGCAGGAAGAACTACTCTGGACTAAATCTCATGACTGATGGCTGGGGCAGTAGCTCTCCTTTAGGATCATCTCCTACAGGAGTTTTGCAGAAGACGACATTTCGGTCCCTGTCTAATAGCACTGCAAGTAGCCCAAGGTCAGAGAACAGAAAACAAGATGGGGCTAGCCTGTGCAACGATCTACTAGGTTCAACTCTGGGAAATTCTTCCTCATTTTCTGCTCTGTAA 1758 0.4704 MDFGVVGVDGVVGSDIGFGSLASDNQTKPKWYGSGSLKQEGSGNTEGDWRSTKLAKTDDFSTSKAMLLHQQRNAAALRSNASVFFDGQQQQHMLSFSSPKPEVLLVDKNSQNAALPYSYQSVSPCTRTTGYSSASLNGASMHGVLSGPRGPFTPSQWIELEHQALIYKYFTADVPVPSNLLVPIKKALESTGVCSYSGGLLRPNSLGWGSFHLGFSSNADPEPGRCRRTDGKKWRCSRDAVPDQKYCERHMNRGRHRSRKHVEGQSGHAVTATTTTTSKLLPNTSSSHMSTMIDGGSSDITFARQAPSEPHKGSVPGSTNGLFVSSKLNASEKKQDTPSLSMFSSAMELKSKGNSFLINESQYPCEESSRTQFGLVTSESLLNPSQKETPQSIRYFIDDWPKNPSDRCSLSWQDVDTQTERTQLSISIPMPPSDFSKSISTASNEQLKLSSLRHSCELEPMHEGLGLGSSNVVVSESCNTSQANWIPIRWESSMGGPLGEALQHSNNGNECRKNYSGLNLMTDGWGSSSPLGSSPTGVLQKTTFRSLSNSTASSPRSENRKQDGASLCNDLLGSTLGNSSSFSAL* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01112 585 MobiDBLite consensus disorder prediction 546 566 - -
Pte2g01112 585 SMART QLQ_2 150 186 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte2g01112 585 MobiDBLite consensus disorder prediction 31 50 - -
Pte2g01112 585 ProSiteProfiles WRC domain profile. 220 264 IPR014977 -
Pte2g01112 585 ProSiteProfiles QLQ domain profile. 151 186 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte2g01112 585 PANTHER GROWTH-REGULATING FACTOR 5 112 434 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pte2g01112 585 Pfam QLQ 151 184 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte2g01112 585 Pfam WRC 221 263 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01112 Pte-Chr2 12083474 12087439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01112 17 544 GRF Transcription Factor Family AT2G22840 39.636 3.05e-87 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pte2g01112 WRC 4.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01112 - - qsa:O6P43_015955 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01112 2 12083474 12087439 Pte2g01112 2 12083474 12087439 RCT