Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01088 ATGGTAGGCTTTGAAATATTTACTTGGTGTCAACTGGGGGTTCCTTTGCTTTCAGCAATAGGCACTTTGCTGGCGATGATTGTAGGACTGTGCTGCTACTTATATGGGCCCTATTGGAGTGTCAGGAACGTACCAGGGCCACCGACTTTCCCCCTGGTCGGACACCTGCCCTTGATGGCTAAGTATGGCCCCGACGTCTTCTCAGTGCTTGCCAAACAATACGGACCCATCTACAGATTTCATATGGGAAGACAGCCATTGGTAATCATAGCAGATGCTGAACTGTGCAAAGAAGTTGGGATAAAGAAGTTTAAAGGCATTCCTAACAGAAGCATTCCCTCTCCTATTGCTGCTTCTCCTCTTCATCAAAAGGGTCTCTTCTTTACCAAGGATGCAAGATGGTCAACCATGCGAAATACCATATTGTCAGTCTACCAGCCATCACATTTAGCAAGCCTTGTGCCCACTATGCAGTCGTTTATAGATGCTGCAACCCAGAATCTTGACTGTTGCAAAGAAGATATCATCTTCTCCAACTTGTCACTCAAATTGGCAACTGATGTAATAGGGCAAGCAGCCTTTGGTGTTGATTTTGGCCTTTCTAAACCTGGAGCCATCTCCCATTCAGACAAATGCCGTAGTGACCACCAAGAAAAATCTAGTGAAGTATCTGATTTTATCAATAAACATGTTTACTCTACGACACAACTTAAGATGGATTTGTCCGGCTCTTTCTCCATCATACTTGGTCTACTCATCCCAATACTTCAGGAGCCCTTTAGGCAAATTTTGAAGAGAATACCAGGAACCATGGACTGGAAGGTTGATCGTACTAATAAGGCTTTGAGTAACCGTCTGGGGGAGATTGTGCAGAAGAGAATGCAAGACAGACACCGTTCTTCAAAGGATTTCTTGTCCCTTATATTGAATGCTAGGGAGTCAGAGACGTCAGCAAGGGATGCCTTCACGTCAGATTATGTGAGTGCTGTGACATATGAACACTTGCTTGCTGGTTCAGCCACCACATCCTTCTCTTTATCTTCGGTTGTTTATTTAGTTGCTCAACACTCAGAAGTAGAGAACAAATTACTTGAGGAGATTGACGGGTTTGGGCCACCTGAAAAGATGCCTGCGGCTCATGATCTTCAAGACAAATTCCCTTACCTTGATCAGGTCATCAAAGAGGCAATGCGATTTTACTTTGTTTCTCCATTAGTTGCAAGAGAAACATTGAATCAAGTTGAAATAGGAGGTTACATCCTTCCCAAGGGGACATGGGTTTGGTTAGCACTTGGCGTTCTAGCCAAGGATCCAAAGAATTTCCCAGAGCCAGACAAGTTTAAACCAGAGCGGTTCGATCCCAATTGTGAAGAAATGAAACGAAGGCACCCTTATGCTTTCATGCCATTTGGAATTGGTCCTCGAGCATGCATTGGCCAGAAATTCTCTCTACAAGAGATCAAGCTCTCTTTGATTCATTTATACCGCAAGTACCTATTTCGACATTCACCTCACATGGAGAAACCGCTGGAACTAGAGTTTGGCATTGTCCTCAACTTCAAGCATGGGGTAAAGCTTAGAGCAGTTAAAAGGATACATTGA 1602 0.4401 MVGFEIFTWCQLGVPLLSAIGTLLAMIVGLCCYLYGPYWSVRNVPGPPTFPLVGHLPLMAKYGPDVFSVLAKQYGPIYRFHMGRQPLVIIADAELCKEVGIKKFKGIPNRSIPSPIAASPLHQKGLFFTKDARWSTMRNTILSVYQPSHLASLVPTMQSFIDAATQNLDCCKEDIIFSNLSLKLATDVIGQAAFGVDFGLSKPGAISHSDKCRSDHQEKSSEVSDFINKHVYSTTQLKMDLSGSFSIILGLLIPILQEPFRQILKRIPGTMDWKVDRTNKALSNRLGEIVQKRMQDRHRSSKDFLSLILNARESETSARDAFTSDYVSAVTYEHLLAGSATTSFSLSSVVYLVAQHSEVENKLLEEIDGFGPPEKMPAAHDLQDKFPYLDQVIKEAMRFYFVSPLVARETLNQVEIGGYILPKGTWVWLALGVLAKDPKNFPEPDKFKPERFDPNCEEMKRRHPYAFMPFGIGPRACIGQKFSLQEIKLSLIHLYRKYLFRHSPHMEKPLELEFGIVLNFKHGVKLRAVKRIH* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01088 533 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 PANTHER THROMBOXANE-A SYNTHASE 20 531 - -
Pte2g01088 533 Pfam Cytochrome P450 45 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 Gene3D Cytochrome P450 34 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Pte2g01088 533 SUPERFAMILY Cytochrome P450 38 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte2g01088 533 Coils Coil 526 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01088 Pte-Chr2 11820313 11823441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01088 82 531 Cytochrome P450 AT2G26170 74.222 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01088 K20771 - jre:109008872 838.565