Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01084 ATGTCGACGGTGTATGTGTTAGAGCCACCAACGAAGGGGAAAGTGGTGGTGCAGACCACTCATGGGCCTCTGGACATAGAGCTATGGCCCAAGGAGGCCCCCAAAGCTGTCAGGAACTTTGTCCAGCTCTGCCTTGAAGGTTATTATGACAACAACATTTTTCACCGTATCATCAAGGACTTTCTCATCCAAACTGGCGATCCTACCACCACTGGGACAGGCGGTGAGAGCATTTATGGAGGTGTTTTTGCAGATGAGTTCCACTCACGTTTACGATTCAAGCACAGAGGTATAGTTGCTATGGCGAATGCAGGTTCACCTCATTCTAATGGGAGTCAGTTTTTTATCACTCTTGATCGTTGTGAATGGCTTGATAAGAAACACACCATTTTTGGCAAGGTGACAGGAGATACCATTTACAATCTAGTGGGATTGGGTGAAATTGAAACTGATAAGAATGACAGACCCTTGGATCCGCCTCCAAGGATTTTATCAGTTGAGGTTTTGTGGAATCCATTTGATGATATTGTTCCGAGAGCACCTGCAAAACCTTCCATGGAGGCGACCACTGATGCAGACAAAAAAAAATCAAAGAAAGTTGTTAAAAAGTTAAATCTTCTCTCATTTGGGGAAGAAGCTGAGGAAGAGGAAAAGGAATTGGCATCCATCAAGCAGAAAATAAAGAGTAGTCATGATGTTTTGGACGATCCTCGCCTTTTAAAAGATGAAACTGCCTATAATGATTTGATGCAGAACTCAGTTAGTGAGAAATCAACAAGGGATGTGCAGTTATCTGTAAGAGAAGCTCTAACCTCAAAGAAAGAAGCTAATCAGAGAGATAGAGGAGAAGATGCTTTGAATGATCTGGACTATAGTGACGACGATGAGGCAAATTTTGATGAGAGAATGCGCATGCAAATACTTCTAAAGCGAAGGGAGTTAGGTGATTTTCCGCCAACGAAAAGCAAACATGATGATATTCCCAAATCAAAGGAACAGGAAAGACGTGTCCCCAGCTCTGATGATGATCAACCTAAGAAAGAAAAGCTTTCCTTGAAGAAGAAAGGCATAGGATCGGAAGCAAGAGCTGAACGAATGGCTAATGCAGATACAGACATGCAATTGCTAAATGATGTTGAACGAGGGAGGCAATTGCTGAAGCAAAAGAAACGCAGACTTCAAGGACGTGAAGACGAGGTTCTAGCAAAACTTGAGAGATTTAAGAAGGCTGTTTCGGAAAAGCCATCGACTTCAAATGACGAACCTGGTACAGGGAATGATGATGTATCTGACTGGAAATCTGTTCCCTTAAAGTTTGCACCCGAGACTGGCAAGGACGGCATGTCTCGCAAGGATGACCCGAATGACTATGTTGTGCATGACCCACTTTTAGAGAAAGGGAAAGAGAAATTCAACAGGATGCAAGCAAAGCAGAAAAGGCGAGAACGTGAATGGGCTGGAAAATCGCTTACTTGA 1476 0.4329 MSTVYVLEPPTKGKVVVQTTHGPLDIELWPKEAPKAVRNFVQLCLEGYYDNNIFHRIIKDFLIQTGDPTTTGTGGESIYGGVFADEFHSRLRFKHRGIVAMANAGSPHSNGSQFFITLDRCEWLDKKHTIFGKVTGDTIYNLVGLGEIETDKNDRPLDPPPRILSVEVLWNPFDDIVPRAPAKPSMEATTDADKKKSKKVVKKLNLLSFGEEAEEEEKELASIKQKIKSSHDVLDDPRLLKDETAYNDLMQNSVSEKSTRDVQLSVREALTSKKEANQRDRGEDALNDLDYSDDDEANFDERMRMQILLKRRELGDFPPTKSKHDDIPKSKEQERRVPSSDDDQPKKEKLSLKKKGIGSEARAERMANADTDMQLLNDVERGRQLLKQKKRRLQGREDEVLAKLERFKKAVSEKPSTSNDEPGTGNDDVSDWKSVPLKFAPETGKDGMSRKDDPNDYVVHDPLLEKGKEKFNRMQAKQKRREREWAGKSLT* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01084 491 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Pte2g01084 491 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Pte2g01084 491 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Pte2g01084 491 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Pte2g01084 491 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Pte2g01084 491 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Pte2g01084 491 CDD cyclophilin_CeCYP16-like 8 179 - -
Pte2g01084 491 MobiDBLite consensus disorder prediction 310 367 - -
Pte2g01084 491 Coils Coil 206 233 - -
Pte2g01084 491 SUPERFAMILY Cyclophilin-like 14 182 IPR029000 -
Pte2g01084 491 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 218 IPR044666 -
Pte2g01084 491 MobiDBLite consensus disorder prediction 310 379 - -
Pte2g01084 491 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 159 IPR002130 GO:0000413|GO:0003755
Pte2g01084 491 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 180 - -
Pte2g01084 491 MobiDBLite consensus disorder prediction 407 491 - -
Pte2g01084 491 MobiDBLite consensus disorder prediction 272 286 - -
Pte2g01084 491 MobiDBLite consensus disorder prediction 444 491 - -
Pte2g01084 491 MobiDBLite consensus disorder prediction 269 294 - -
Pte2g01084 491 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 168 IPR002130 GO:0000413|GO:0003755
Pte2g01084 491 Coils Coil 376 396 - -
Pte2g01084 491 Gene3D - 2 182 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01084 Pte-Chr2 11717713 11724238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01084 9 173 U-box Gene Family AT5G67530 48.485 2.95e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01084 K12737 - zju:107420107 694.115