Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01079 ATGAGTTTAGGAGCGGCCGAGGACGATTCGGCTTCAGAAATTCATCTGCCTGCAGAAATAGACTGGCACATGCTTGACAAATCTAGGTTTTTCTTTTTTGGCGCTGCCTTATTTTCTGGGGTATCAGCTGCACTCTACCCCATAATTGTGTTAAAAACTCGTCAACAAGTATGTCATACACAAGTTTCTTGTTTGAAAATGTCTTTCTCCATTATGCGTTATGAAGGTTTCAGAGGGTTCTACAGAGGTTTCGGTACTTCATTGTTGGGAACAATCCCAGCTCGGGCACTTTACATGACTGCGCTTGAAGTTACCAAGAGTAATGTAGGCAACGCTACTCTTGCATTGGGATTTTCCGATACAACGGCCACGGCATTCGCTAACGCTGCTGCAGGACTAAGTTCTGCATTGGCTGCACAACTGGTTTGGACACCCATTGATGTTGTGAGCCAAAGACTCATGGTGCAGGGCTGCGACAAAAGCATAGGTGCCAATGCCTATTCTGGGAATTACAGCAACGGATTTGATGCGTTCAGGAAGATTGTGCGTTCGGATGGATTCGGAGGAGTATACAGAGGTTTTGGGGTTTCGATGTTGACTTATGCACCATCTAATGCAGTTTGGTGGGCTTCTTACTCTGTAGCGAACAGGTTCATGTGGGGGAGTTTTGGATGCTACGCAAGTAAGAAGGACAAAAGTGGTTTAGCTTATGGTTGCGCACTTAGGCCTGACTCCAAGGCAATGGTAGCTGTTCAGAGTTTGAGTGCAGTCATGGCAAGTGGGGTTTCAGCCATTATTACCATGCCGCTTGACACAATAAAGACCCGTCTGCAAGTGCTTGATGCAGAGGAAAATGGCCGAAGAAGGCCATTGACGGCTTTGCAGGTGGTAAGGAATCTGATGAGGGAAGGTGGTTTGGCAGCTTGTTACAGAGGATTGGGACCAAGGTGGGCATCTATGTCCATGTCTGCAACAACAATGATTACCACCTATGAATTTTTGAAACGCATGTCTGCTAAGAACCAAGAGAAACAGAAATACAGCTCCTGA 1050 0.4629 MSLGAAEDDSASEIHLPAEIDWHMLDKSRFFFFGAALFSGVSAALYPIIVLKTRQQVCHTQVSCLKMSFSIMRYEGFRGFYRGFGTSLLGTIPARALYMTALEVTKSNVGNATLALGFSDTTATAFANAAAGLSSALAAQLVWTPIDVVSQRLMVQGCDKSIGANAYSGNYSNGFDAFRKIVRSDGFGGVYRGFGVSMLTYAPSNAVWWASYSVANRFMWGSFGCYASKKDKSGLAYGCALRPDSKAMVAVQSLSAVMASGVSAIITMPLDTIKTRLQVLDAEENGRRRPLTALQVVRNLMREGGLAACYRGLGPRWASMSMSATTMITTYEFLKRMSAKNQEKQKYSS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01079 349 PRINTS Mitochondrial carrier protein signature 110 130 IPR002067 GO:0055085
Pte2g01079 349 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Pte2g01079 349 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Pte2g01079 349 PRINTS Mitochondrial carrier protein signature 256 278 IPR002067 GO:0055085
Pte2g01079 349 Gene3D Mitochondrial carrier domain 30 349 IPR023395 -
Pte2g01079 349 Pfam Mitochondrial carrier protein 250 341 IPR018108 -
Pte2g01079 349 Pfam Mitochondrial carrier protein 124 220 IPR018108 -
Pte2g01079 349 Pfam Mitochondrial carrier protein 39 109 IPR018108 -
Pte2g01079 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 247 337 IPR018108 -
Pte2g01079 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 108 IPR018108 -
Pte2g01079 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 343 - -
Pte2g01079 349 SUPERFAMILY Mitochondrial carrier 24 334 IPR023395 -
Pte2g01079 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 218 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01079 Pte-Chr2 11672545 11673594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01079 1 343 Chloroplast and Mitochondria Gene Families AT1G72820 69.075 1.90e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01079 K15121 - qsa:O6P43_015862 521.161