Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01073 ATGAGCATGTCGGAGAAGAAAGCTGCGAACGATGGTGCGGAAGTGGTGATTATGATGCCTAGCGAAGAGATTCCCAGAAAGAGTGCTGAGGGGAAAAACCTCCGAGGGTCTACTACATTGCCACCGAAGCCTCAGAATGTTCCTCCTAGCAGCTGCCCTTCCCCTGAGATTTCTAAGATGAGTCCTAGCCCAAAGAAGCCTCCTAAAATTCCTACTGGGAATGAAACCCTTATACGGAGAAAGTCACTAGCAAGGACAATATCTTCCAAGCCCAAAGCAAGGTTTGCTGAAGAGACATGTGTTTTTGATGAGACCATGTTTGAAGAGAACTATGGTTCAAATATGAAAGAACATGTGGTGCCTGGTTCACCTTATGGCAACTCTCTCAATTCTATGTCCCCTAATAACAAACCGACCACTGTTGCTAAGATGCTTTCCACTGCCTCCATCACTTCGGGAGCAGCAAAGGAGGATGAATATGAAATTATCTACAAGGAGATTGAGTTAAGTGAAGGGAAGCGTAAAAAGGTGAGTATTAAGGTGCTGATTGAATGGATTGCTCTTGTTTGCATAGCGGGATGCTTGGTGGCTAGTCTGACTGTTAATAAACTAAGACATTTGAGTTGGGGCTTGGAATTATGGAAGTGGTGTTTACTCGTGATGGTGATCTTCTTTGGTATGTTGGTTACCAAATGGTGCATGCGTCTTGTTGTTTTCTTGATCGAGATGAACTTCTTGCTGAAGAAGAAGGTCCTATACTTTGTCTACGGGCTGAAGAAGAGTGTGCAGATGTTCATTTGGTTGAGCTTAGTTCTTCTTTCCTGGGTTCTGTTAATTGACCGCAGTATTGAGCAGAACAAAGTGGCTACCAAAATCCTTGATTCTGTGACATGGACACTTGTTTCTCTACTAATAGGAGCATTTTTGTGGTTGTTGAAGACTTTGTTAATTAAGATTCTGGCTTCCAATTTCCACGTGAATAATTTTTTTGACAGAATTCAGGAATCTATGTTCCATCAGTATGTTCTGCAAGTACTTTCAGGACCTCCGGTTATAGAGCAGGCTGAGAGGGTTGGAAGATCACCGAGCGCTGGTCAATTTAGTCTCAGGAGCACTGGTGCTAAAGGAGAAACAAAAAAAGAGGTAATTGATGTGGGAAAGCTTCAGGAGTTGAAACATGAAAAGGTATCTGCTTGGACTATGAAGGTCTTGATTGATGCAGTGACAAGCTCTGGGCTCTCGACGATATCCAATGCATTAGACCAAAATTTTGATGATGGAATAGCAGGAGCAGCAGATAAGGAAATTACCAGCGAGATGGAAGCAGCAGCTGCTGCCTATCACATCTTCAGAAATGTTGCTCAGCCTGGTTGCTCGTACATTGATGAAGAAGACCTCCGCAGATTTATGATTAAGGAAGAAGTGGATTTGGTATTTCCGCTCTTTGAAGGGGCAGATACTGGAAAAATTGACAGGAAGGCACTGACAAATTGGGTGGTGAAGGTCTACCAGGGTCGTAAAGCCCTAGCACATGCTTTAAATGATACCAAAACTGCTGTAAAACAATTGAACAAGCTTGTATCAGCGATATTGATTGTTGTGACCATAATTGTGTGGCTTTTGCTGATGGGAATTGCTACAACTAAAGTTCTTTTGTTTCTGTCATCACAACTCGTTGTAGCAGCTTTTGTTTTTGGAAATACATGCAAACAAATATTTGAAGCTATCATCTTCGTATTCGTGATGCATCCTTTTGATGTGGGTGATCGTTGTGTTGTTGATGGAGTCCCGATGTTGGTTGAAGAGATGAATATTTTGACCACAGTTTTCTTGAAGCTTGATAACGAAAAGGTTTTCTATCCAAATTCAATTTTGGCTACAAAGCCTATCAGCAACTATTTCAGAAGCCCAAACATGGGTGATGGCATAGAATTCTCAATTGATTTTTCAACCCCAATCGAGAGGATTGGGACCATGAAAGAAAAAATTGCAAAGTACATAGAGAGGAATCAGCAACATTGGCAACCTATCCACAGTGTGATAGTGAAGGAGATAGAAAACGTGAACAAGATAAAGGTTGCTCTCTATGTTACGCACACTATGAACTTCCAAAATTATGGAGAGAAGAACAATCGGAGATCTGAATTAGTCATGGAATTAAAGAAAATATTTGAAGAACTGAATATCAAATACAACCTTCTTCCTCAGGCAGTTTATCTTCATCAGATTGGACCAGAAACAATTGTTCCCAAATGA 2256 0.4131 MSMSEKKAANDGAEVVIMMPSEEIPRKSAEGKNLRGSTTLPPKPQNVPPSSCPSPEISKMSPSPKKPPKIPTGNETLIRRKSLARTISSKPKARFAEETCVFDETMFEENYGSNMKEHVVPGSPYGNSLNSMSPNNKPTTVAKMLSTASITSGAAKEDEYEIIYKEIELSEGKRKKVSIKVLIEWIALVCIAGCLVASLTVNKLRHLSWGLELWKWCLLVMVIFFGMLVTKWCMRLVVFLIEMNFLLKKKVLYFVYGLKKSVQMFIWLSLVLLSWVLLIDRSIEQNKVATKILDSVTWTLVSLLIGAFLWLLKTLLIKILASNFHVNNFFDRIQESMFHQYVLQVLSGPPVIEQAERVGRSPSAGQFSLRSTGAKGETKKEVIDVGKLQELKHEKVSAWTMKVLIDAVTSSGLSTISNALDQNFDDGIAGAADKEITSEMEAAAAAYHIFRNVAQPGCSYIDEEDLRRFMIKEEVDLVFPLFEGADTGKIDRKALTNWVVKVYQGRKALAHALNDTKTAVKQLNKLVSAILIVVTIIVWLLLMGIATTKVLLFLSSQLVVAAFVFGNTCKQIFEAIIFVFVMHPFDVGDRCVVDGVPMLVEEMNILTTVFLKLDNEKVFYPNSILATKPISNYFRSPNMGDGIEFSIDFSTPIERIGTMKEKIAKYIERNQQHWQPIHSVIVKEIENVNKIKVALYVTHTMNFQNYGEKNNRRSELVMELKKIFEELNIKYNLLPQAVYLHQIGPETIVPK* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01073 751 Pfam Mechanosensitive ion channel 524 730 IPR006685 GO:0016020|GO:0055085
Pte2g01073 751 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 3 745 IPR016688 -
Pte2g01073 751 MobiDBLite consensus disorder prediction 1 80 - -
Pte2g01073 751 FunFam Predicted mechanosensitive ion channel 584 633 - -
Pte2g01073 751 Gene3D - 584 633 IPR023408 -
Pte2g01073 751 PIRSF Memb_At2g17000 13 749 IPR016688 -
Pte2g01073 751 SUPERFAMILY Sm-like ribonucleoproteins 574 633 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01073 Pte-Chr2 11616692 11620435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01073 3 740 Mechanosensitive Ion Channel Family AT5G12080 59.195 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01073 K22048 - qsa:O6P43_019135 1040.41