Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01072 ATGAGCATTGGAGGCACTCCTGATCAGCCCCTGAAGAAGAAAGCCACTACAAACTCGTTGACAAAAGGGAAACAAGGGAAGAGCTTGTCACAGGGATGTTGTAGAGGTTTCAAGGATTGTATAATCATGGGATCAACCTTATCAAGTAACCAATACCGACACCAATCTTCAAATGGTCTGGAACACAAGGTGGCCGACTTGGAGAGGGAAGTACGGAAACTCAAAGAAGCGTGCATGCTCTATAGAAAGAGGATGGAAAGTGCGCAACACTACCTTAGGTACTGTCTTCAAATAGTACAGGACAACGGTTTGATGGAGTTTCTTATACACAGCAAAGGCGATCCACCACAACAATCTCTTTTATCCACTCCTATCAGCTGCCGTACCAGTCCTCATCAAATGCCTACACCGCACAGCCAACATGCTTATTTAGCAGCCATCACTGATGAAGCCCATCAACATGGATGGTACATCGATCCATCGGAGATTGAGCTGGTGGAGAAAATAGCACGAGGAAGCACAGCAAACATTTACAGAGGAACGTGGCGAGGGATGGATGTGGCGGTCAAGTGCTTAACTTCAGAATTCTTTAGCTCAAACGAGAATGGAGGGACATTTTTTGCTCAAGAGGTTGAGACACTCTCCAGGCAACGTCACCGTTATGTGTTACGATTGATGGGTGCCTGCCTCCAACCTCCTCGATATGCTTGGATAGTGACAGAGTTTTTAAGCACCAACCTCAAGGAGTGGCTTCATGGACCAGGAAAAAGGCAAAGAGAAAGAGTCATACCAATCCCTCCATTAAGAGACAGAGTGTGCAAGGCTGTAGAGATTGCTCAAGCCATGCAATACCTTCACGAGCAAAAACCAAAAGTCATTCACCGAGACTTAAAACCTAGCAACATCTTCTTGGATGATGGCATGCATGTCAGAATAGCAGACTTTGGTCATGCGAGATTCTTAAACGATGAAGAGATGGCTCTAACTGGGGAAACAGGAACATACGTGTACATGGCGCCAGAGGTGATCCGATCCGATCCTTATACTGAAAAATGTGATGTATATAGTTTTGGAATTATACTTAATGAGATTATGACTGGAAACTATCCGTACATCGAGATCAACTCTTCCCCTACCGAGATTGCTATGGAGGTTGTAGAAGAGAATCGCAGGCCAATGCTTCCAAGCAAGTGTGACAGAGAGAACATGAAAGAACTTGTACATCTCATTTGCCTTTGTTGGGACGGAGATCCATCTTTCAGACCATCCTTTGCTACAATCACATGCAGTATCAAAAACATTGCTAAGCAGCTCATAGATAACAATATTTGA 1332 0.4452 MSIGGTPDQPLKKKATTNSLTKGKQGKSLSQGCCRGFKDCIIMGSTLSSNQYRHQSSNGLEHKVADLEREVRKLKEACMLYRKRMESAQHYLRYCLQIVQDNGLMEFLIHSKGDPPQQSLLSTPISCRTSPHQMPTPHSQHAYLAAITDEAHQHGWYIDPSEIELVEKIARGSTANIYRGTWRGMDVAVKCLTSEFFSSNENGGTFFAQEVETLSRQRHRYVLRLMGACLQPPRYAWIVTEFLSTNLKEWLHGPGKRQRERVIPIPPLRDRVCKAVEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDGMHVRIADFGHARFLNDEEMALTGETGTYVYMAPEVIRSDPYTEKCDVYSFGIILNEIMTGNYPYIEINSSPTEIAMEVVEENRRPMLPSKCDRENMKELVHLICLCWDGDPSFRPSFATITCSIKNIAKQLIDNNI* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01072 443 MobiDBLite consensus disorder prediction 11 28 - -
Pte2g01072 443 SMART serkin_6 163 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01072 443 Coils Coil 57 84 - -
Pte2g01072 443 Gene3D Phosphorylase Kinase; domain 1 152 243 - -
Pte2g01072 443 ProSiteProfiles Protein kinase domain profile. 163 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01072 443 SUPERFAMILY Protein kinase-like (PK-like) 138 427 IPR011009 -
Pte2g01072 443 Pfam Protein tyrosine and serine/threonine kinase 163 428 IPR001245 GO:0004672|GO:0006468
Pte2g01072 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Pte2g01072 443 Gene3D Transferase(Phosphotransferase) domain 1 265 442 - -
Pte2g01072 443 CDD STKc_MAP3K-like 169 428 - -
Pte2g01072 443 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 93 428 - -
Pte2g01072 443 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01072 Pte-Chr2 11612685 11614713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01072 156 441 MAP Kinase Kinase Kinase AT4G35780 35.540 1.08e-49 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Pte2g01072 PK_Tyr_Ser-Thr 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01072 - - qsa:O6P43_015854 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01072 2 11612685 11614713 Pte2g01072 2 11612685 11614713 RCT