Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte2g01049 | ATGACAATTGGTTCTGGGCTGGCCTCTTACCCAATTGATACTATGCGTAGAAGAATGATGATGACTTCTGGAGAAGCTGTTAAATACAAGAGCTCTTTGGATGCTTTCAATCAAATTGTGAAAAAGGAGGGCACCAAATCACTCTTCAAAGGTGCCGGTGCAAACATTCTGCGTGCTGTTGCAGGTGCTGGTGTTCTCGCTTCATGA | 207 | 0.4444 | MTIGSGLASYPIDTMRRRMMMTSGEAVKYKSSLDAFNQIVKKEGTKSLFKGAGANILRAVAGAGVLAS* | 69 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte2g01049 | 68 | Gene3D | Mitochondrial carrier domain | 1 | 68 | IPR023395 | - | |
| Pte2g01049 | 68 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 1 | 68 | IPR018108 | - | |
| Pte2g01049 | 68 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 1 | 67 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
| Pte2g01049 | 68 | SUPERFAMILY | Mitochondrial carrier | 5 | 65 | IPR023395 | - | |
| Pte2g01049 | 68 | Pfam | Mitochondrial carrier protein | 3 | 65 | IPR018108 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte2g01049 | Pte-Chr2 | 11352683 | 11353263 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte2g01049 | 1 | 67 | Antiporters | AT5G13490 | 89.552 | 1.18e-35 | 121 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte2g01049 | K05863 | - | bvg:104902831 | 124.79 |