Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01028 ATGAAGCTTCTTCTCAGGCTGTTTGCGTTGATGTTTCTTATTCTAAACGAGTCCATTTGGCTTCGAGCCACTCCAACACCTGAACCTACATTACCTGTACTTCGTTCTTCACCGGCAGTCTCACCATTTTCTTCAATTCCGTCATCAATGGCTTCCTTCTCTCCAGGTTTTGAGGTAGGAAGAGCAGAGCATCAGAACAACCAACACAAGAGAATGCTTATAGCACTGATTGTGGTCTCCTCTGCACTCTCTGCTATCATATTGTGTCTTCTTTTCTGGTGGATATATCGTATGACATACCTATGCAAATCTTACAAGAGACATTCTCCAAGCTCAGATGCTGAGAGAGGTATCTCATTGGCGCCATTTCTGGGTAAATTTAGTTCCGTAAGAATGGTGGGGAAGAAGGGATCTGTTTCATTGATTGAGTACGAACAAATAGAGAAAGCGACGGGTAATTTTCAGCAGGGTAATATTTTGGGAGAGGGTGGATTTGGGTGTGTTTATAAGGCTAGCTTAGATGACAATTTGAATGTAGCAGTCAAGAAACTACACTGCGAAAGGCAGGATGCTGAGAGAGAATTTGAGAATGAGGTGAATTTGTTGAGCAAAATTAAGCATCCCAATATAATCTGTCTGCTGGGCTGTAGCATTAGCCGTGATTCGAAGTTAATTGTATACGAACTGATGAACAACGGTTCTCTGGAGACTCAGCTACATGGACCATCTCATGGTTCAGCACTAACTTGGCAGATGCGGATGAAGATTGCTCTTGATACAGCAAGAGGCTTGGAGTATCTGCATGAGCATTGTCATCCACAAGTTATCCATAGAGATCTGAAATCTTCTAATATTCTTTTGGATGCAAACTTCAGCGCGAAGCTTTCTGATTTTGGTCTTGCTGTGGCTGCTGGTTCTCAAAACAAAAACAGCATCAAGCTTTCTGGTACATTGGGTTATGTAGCCCCTGAATATCTTTTAGATGGAAAATTGACTGATAAAAGTGACGTATATGCTTTTGGGGTAGTACTCCTTGAACTTCTCTTGGGAAGGAAGCCAGTGGAAAAACTGTCACCAGCTCAGTGCCGATCTATTGTCACATGGGCCATGCCTCAACTCACTGACAGGTCGAAGCTTCCAAACATAATAGATCCTGTGATCAAGGACACGATGGATCTCAAGCATTTATACCAGGTTGCTGCTGTTGCAGTGTTATGTGTGCAAACAGAACCAAGTTACCGCCCACTGATTACAGATGTTCTTCATTCACTCATCCCACTGGTTCCCATTGAGCTTGGAGGAACCCTCAGAGTTTCACGAGCTAATCACCGAGAATCTTCTGCTGATACGACACCAGTGCCCTGTTGA 1368 0.4342 MKLLLRLFALMFLILNESIWLRATPTPEPTLPVLRSSPAVSPFSSIPSSMASFSPGFEVGRAEHQNNQHKRMLIALIVVSSALSAIILCLLFWWIYRMTYLCKSYKRHSPSSDAERGISLAPFLGKFSSVRMVGKKGSVSLIEYEQIEKATGNFQQGNILGEGGFGCVYKASLDDNLNVAVKKLHCERQDAEREFENEVNLLSKIKHPNIICLLGCSISRDSKLIVYELMNNGSLETQLHGPSHGSALTWQMRMKIALDTARGLEYLHEHCHPQVIHRDLKSSNILLDANFSAKLSDFGLAVAAGSQNKNSIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLSPAQCRSIVTWAMPQLTDRSKLPNIIDPVIKDTMDLKHLYQVAAVAVLCVQTEPSYRPLITDVLHSLIPLVPIELGGTLRVSRANHRESSADTTPVPC* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01028 455 Gene3D Phosphorylase Kinase; domain 1 124 229 - -
Pte2g01028 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Pte2g01028 455 ProSiteProfiles Protein kinase domain profile. 154 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01028 455 CDD STKc_IRAK 160 427 - -
Pte2g01028 455 SMART serkin_6 154 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01028 455 FunFam Protein kinase superfamily protein 121 229 - -
Pte2g01028 455 ProSitePatterns Protein kinases ATP-binding region signature. 160 183 IPR017441 GO:0005524
Pte2g01028 455 PANTHER OS01G0750732 PROTEIN 35 429 - -
Pte2g01028 455 Coils Coil 181 201 - -
Pte2g01028 455 SUPERFAMILY Protein kinase-like (PK-like) 135 424 IPR011009 -
Pte2g01028 455 Gene3D Transferase(Phosphotransferase) domain 1 230 429 - -
Pte2g01028 455 FunFam probable receptor-like protein kinase At1g80640 230 429 - -
Pte2g01028 455 Pfam Protein tyrosine and serine/threonine kinase 155 391 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01028 Pte-Chr2 11070255 11073534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01028 4 370 Receptor kinase-like Gene Family AT1G80640 46.739 1.00e-106 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pte2g01028 PK_Tyr_Ser-Thr 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01028 - - qsa:O6P43_015740 640.188