Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte2g01028 | ATGAAGCTTCTTCTCAGGCTGTTTGCGTTGATGTTTCTTATTCTAAACGAGTCCATTTGGCTTCGAGCCACTCCAACACCTGAACCTACATTACCTGTACTTCGTTCTTCACCGGCAGTCTCACCATTTTCTTCAATTCCGTCATCAATGGCTTCCTTCTCTCCAGGTTTTGAGGTAGGAAGAGCAGAGCATCAGAACAACCAACACAAGAGAATGCTTATAGCACTGATTGTGGTCTCCTCTGCACTCTCTGCTATCATATTGTGTCTTCTTTTCTGGTGGATATATCGTATGACATACCTATGCAAATCTTACAAGAGACATTCTCCAAGCTCAGATGCTGAGAGAGGTATCTCATTGGCGCCATTTCTGGGTAAATTTAGTTCCGTAAGAATGGTGGGGAAGAAGGGATCTGTTTCATTGATTGAGTACGAACAAATAGAGAAAGCGACGGGTAATTTTCAGCAGGGTAATATTTTGGGAGAGGGTGGATTTGGGTGTGTTTATAAGGCTAGCTTAGATGACAATTTGAATGTAGCAGTCAAGAAACTACACTGCGAAAGGCAGGATGCTGAGAGAGAATTTGAGAATGAGGTGAATTTGTTGAGCAAAATTAAGCATCCCAATATAATCTGTCTGCTGGGCTGTAGCATTAGCCGTGATTCGAAGTTAATTGTATACGAACTGATGAACAACGGTTCTCTGGAGACTCAGCTACATGGACCATCTCATGGTTCAGCACTAACTTGGCAGATGCGGATGAAGATTGCTCTTGATACAGCAAGAGGCTTGGAGTATCTGCATGAGCATTGTCATCCACAAGTTATCCATAGAGATCTGAAATCTTCTAATATTCTTTTGGATGCAAACTTCAGCGCGAAGCTTTCTGATTTTGGTCTTGCTGTGGCTGCTGGTTCTCAAAACAAAAACAGCATCAAGCTTTCTGGTACATTGGGTTATGTAGCCCCTGAATATCTTTTAGATGGAAAATTGACTGATAAAAGTGACGTATATGCTTTTGGGGTAGTACTCCTTGAACTTCTCTTGGGAAGGAAGCCAGTGGAAAAACTGTCACCAGCTCAGTGCCGATCTATTGTCACATGGGCCATGCCTCAACTCACTGACAGGTCGAAGCTTCCAAACATAATAGATCCTGTGATCAAGGACACGATGGATCTCAAGCATTTATACCAGGTTGCTGCTGTTGCAGTGTTATGTGTGCAAACAGAACCAAGTTACCGCCCACTGATTACAGATGTTCTTCATTCACTCATCCCACTGGTTCCCATTGAGCTTGGAGGAACCCTCAGAGTTTCACGAGCTAATCACCGAGAATCTTCTGCTGATACGACACCAGTGCCCTGTTGA | 1368 | 0.4342 | MKLLLRLFALMFLILNESIWLRATPTPEPTLPVLRSSPAVSPFSSIPSSMASFSPGFEVGRAEHQNNQHKRMLIALIVVSSALSAIILCLLFWWIYRMTYLCKSYKRHSPSSDAERGISLAPFLGKFSSVRMVGKKGSVSLIEYEQIEKATGNFQQGNILGEGGFGCVYKASLDDNLNVAVKKLHCERQDAEREFENEVNLLSKIKHPNIICLLGCSISRDSKLIVYELMNNGSLETQLHGPSHGSALTWQMRMKIALDTARGLEYLHEHCHPQVIHRDLKSSNILLDANFSAKLSDFGLAVAAGSQNKNSIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLSPAQCRSIVTWAMPQLTDRSKLPNIIDPVIKDTMDLKHLYQVAAVAVLCVQTEPSYRPLITDVLHSLIPLVPIELGGTLRVSRANHRESSADTTPVPC* | 456 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte2g01028 | 455 | Gene3D | Phosphorylase Kinase; domain 1 | 124 | 229 | - | - | |
Pte2g01028 | 455 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 275 | 287 | IPR008271 | GO:0004672|GO:0006468 | |
Pte2g01028 | 455 | ProSiteProfiles | Protein kinase domain profile. | 154 | 425 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte2g01028 | 455 | CDD | STKc_IRAK | 160 | 427 | - | - | |
Pte2g01028 | 455 | SMART | serkin_6 | 154 | 425 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte2g01028 | 455 | FunFam | Protein kinase superfamily protein | 121 | 229 | - | - | |
Pte2g01028 | 455 | ProSitePatterns | Protein kinases ATP-binding region signature. | 160 | 183 | IPR017441 | GO:0005524 | |
Pte2g01028 | 455 | PANTHER | OS01G0750732 PROTEIN | 35 | 429 | - | - | |
Pte2g01028 | 455 | Coils | Coil | 181 | 201 | - | - | |
Pte2g01028 | 455 | SUPERFAMILY | Protein kinase-like (PK-like) | 135 | 424 | IPR011009 | - | |
Pte2g01028 | 455 | Gene3D | Transferase(Phosphotransferase) domain 1 | 230 | 429 | - | - | |
Pte2g01028 | 455 | FunFam | probable receptor-like protein kinase At1g80640 | 230 | 429 | - | - | |
Pte2g01028 | 455 | Pfam | Protein tyrosine and serine/threonine kinase | 155 | 391 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte2g01028 | Pte-Chr2 | 11070255 | 11073534 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte2g01028 | 4 | 370 | Receptor kinase-like Gene Family | AT1G80640 | 46.739 | 1.00e-106 | 319 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-X | Pte2g01028 | PK_Tyr_Ser-Thr | 3.4e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte2g01028 | - | - | qsa:O6P43_015740 | 640.188 |