Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01020 ATGACTCGTGCATTGCGCAGTGGCACAATTGTAGAAAGCCTCTTAAAAGCGTGGAAGATTGAAGATGATTGCAGGTCTAGACATCAATCTCTCAAGGGAAGGAATAGTGTTTCTTTTTGTACTGCGATGGTCGAACATATCGAGAGGGCCACCACAGATTTGGGAAAATTTAATATGGATGAAAAGTCAAATCATAAGGAGGATTTCTCAGTTGGCGATCTAGAAGTATGCAACAGCATTACAACACGAGTGCTTGATGCAACTGTTAAGCAGTGGGTTCACGTTGTTTGTGGCCTTTGGACTCCAGGAACCAGATGCCCAAATGTTAATACTATGAGTGCGTTCGATGTTTCTGGTGTTTCTCATCCCAAAGCTGATGTGGTCTGCTCAATCTGCAAGCGGTGGGGTGGCTCCTGTATAAAGTGCAGGTTCAAGAATTGTTGCACCAGGTTTCATCCTTGGTGTGCTCATAATAAGGGTCTGTTGCAAAGTGAAACCGAAGGTTTTGATGGTGAGAAAGTTGGCTTCTATGGCAGATGTGTATTTCATGCAATAAGTCCATCTTGCCAGCTCAATAGTGACCTTGTTGGCAACAAAAAAGCTTGCCTCAGAGAAAAATATTTTACATGTGCCAGGGTAGAGGTTTACAAGGGTCGTCGCCAAGACAATTTTCGGCATAGTCATTGTAAATCAATTAGCAAAGGTGGGTGCCTTGTTCCGCAGGAGCAGCTGATTGCTTGGATTTACATTAATGGGCAGAAAATTAGTTCACGAGTCTTTCCAAGGCTCCCATTATGTGATATTGAATCTGATACGCGGAAAGAATATGGTAGATACAAACAGGCTAAAGGTTGGAAACGTTTGGTGGTTTACAAGTCCGGCATACATGCTCTCGGTCTTTACACTTCTCAGTTCATATGCCATGGTGAAATGGTTGTTGAGTATGTTGGTGAAATCGTGGGTCTACGAGTGGCTGATAAAAGAGAAGTAGAATATCAATCTGGAAGAAGCCTGCAACATAAGAGTGCGTGCTACTTCTTCAGAATTGACAAGGAAAACATTATCGATGCCACACGCAAAGGAGGGATTGCACGTTTTGTGAATCATTCTTGTCAGGTAGTTTCAGGACTATAA 1134 0.4286 MTRALRSGTIVESLLKAWKIEDDCRSRHQSLKGRNSVSFCTAMVEHIERATTDLGKFNMDEKSNHKEDFSVGDLEVCNSITTRVLDATVKQWVHVVCGLWTPGTRCPNVNTMSAFDVSGVSHPKADVVCSICKRWGGSCIKCRFKNCCTRFHPWCAHNKGLLQSETEGFDGEKVGFYGRCVFHAISPSCQLNSDLVGNKKACLREKYFTCARVEVYKGRRQDNFRHSHCKSISKGGCLVPQEQLIAWIYINGQKISSRVFPRLPLCDIESDTRKEYGRYKQAKGWKRLVVYKSGIHALGLYTSQFICHGEMVVEYVGEIVGLRVADKREVEYQSGRSLQHKSACYFFRIDKENIIDATRKGGIARFVNHSCQVVSGL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01020 377 Gene3D SET domain 256 374 IPR046341 -
Pte2g01020 377 CDD ePHD 91 183 - -
Pte2g01020 377 SMART PHD_3 128 184 IPR001965 -
Pte2g01020 377 SUPERFAMILY SET domain 248 371 IPR046341 -
Pte2g01020 377 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 57 372 - -
Pte2g01020 377 Pfam PHD-zinc-finger like domain 76 164 - -
Pte2g01020 377 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 185 IPR013083 -
Pte2g01020 377 ProSiteProfiles Extended PHD (ePHD) domain profile. 58 184 IPR034732 -
Pte2g01020 377 ProSiteProfiles SET domain profile. 286 377 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01020 Pte-Chr2 10990959 10995550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01020 287 371 C2H2 Transcription Factor Family AT2G23740 31.633 3.91e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01020 - - vvi:100255892 480.33