Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00980 ATGGAGGTGTCCATAGTCTTCGAAGGATGCATCAAGCCTTCTTCTCCAACTCCAAACCACCAAAAGACATATATGTTTTCTTTCTTGGACCAGCTTTTTCCAACTGCCCATTTTCCTATGATATTTTTCTACCCCTTTGATCATGCAAGCTTTAATCCTACTATGATTGTGGATGATATTGTCAACCAAAGATTAAAATTGTTAAAGCAATCACTATTCAAAATCTTGGGCAGCTTTTACCCATTGGCTGGAAGAGTGAAAGATAACCTTTACATTGACTGCAACGATGATGGGGTCTATTATGTGGAGGCCACAGTCAAGTCAAATCTATCTGAATTTCTCAAACAAGCAGGATTGGATGCATCGTTCCTTCACAAATTGGTACCAGGAGGAGAGAATACAAGCGCCATAGCGGCAACTCCGCCAACAAATGTGGCTATGATACAAGTAACGAGCTTTGCTTGCGGTGGTATCGCCATTTGTGTTTCAATTTCTCATGTGATAGCTGATGCTTCTTCAATTCAGTTTTTCATCAAAAGTTGGGCTGCTTCCACTATGGGGAGTGGCCAAATAGTAGTTCCAAATTTCGAGGGTTCAACCCTTTTCCCACCAACCAATGCTATCCCCAGGACGTTCATGGAAACTTTCTACAAAACAAGGAGGTATGTGTTCAAAAGGTTTGGGTTTAATGCCAAAGCAATAGCTACACTTAAAGCAAAAGCATCCAATTCAACCATGCAGAACCCTTCTCGTACTGAGGTTGTTTCAGCTCTCATATGCAAATGCATTGCGAGGCCAATATACACAACGCAATCAGTGAATATACGTCGAAGAGCAGTGCCTTCATTTCCAAATTCATACATGGGAAATTATGTGTGCACAGCAGGAGCAGAATTGGGTATGGTAGACAACGTAGCGTTTCCTGATTTGGTGATTAAATTGAGGGAAGCAGTAACCAAGAGATATGATTCTAAGTTTGTGGAAAACTTGAAATCTGGACCTACAGAATATTTTGACATTTTCAAAGAAATTAGGGAGGCAGGTTGTACTAATGGTGAGCTTGAACTTGTTGCATTTTCTAGCTTTTGTAACTTGGGTTTCTATGACGTTGACTTTGGATGGGGAAAGCCACTGTGGGTGACACTCCAACCCGTGACCAATCCTAGAAACCATGTTATGAACGCTGTCCTTTTGATGGATACACGATCCGGAGATGGAGTAGAGGCCTGGACATGTTTAGATGAAGGAATCATGGCTACATTGCTACGAGATGAGGACTGGATATCTTTTGCTTCTGATGATCCAACTCCTCTAACTCTATCCATGGCCAAATTGTAA 1338 0.4155 MEVSIVFEGCIKPSSPTPNHQKTYMFSFLDQLFPTAHFPMIFFYPFDHASFNPTMIVDDIVNQRLKLLKQSLFKILGSFYPLAGRVKDNLYIDCNDDGVYYVEATVKSNLSEFLKQAGLDASFLHKLVPGGENTSAIAATPPTNVAMIQVTSFACGGIAICVSISHVIADASSIQFFIKSWAASTMGSGQIVVPNFEGSTLFPPTNAIPRTFMETFYKTRRYVFKRFGFNAKAIATLKAKASNSTMQNPSRTEVVSALICKCIARPIYTTQSVNIRRRAVPSFPNSYMGNYVCTAGAELGMVDNVAFPDLVIKLREAVTKRYDSKFVENLKSGPTEYFDIFKEIREAGCTNGELELVAFSSFCNLGFYDVDFGWGKPLWVTLQPVTNPRNHVMNAVLLMDTRSGDGVEAWTCLDEGIMATLLRDEDWISFASDDPTPLTLSMAKL* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00980 445 Pfam Transferase family 2 421 - -
Pte2g00980 445 PANTHER F21J9.9 5 427 - -
Pte2g00980 445 Gene3D - 1 213 IPR023213 -
Pte2g00980 445 Gene3D - 220 428 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00980 Pte-Chr2 10346888 10348225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00980 1 380 Monolignol Biosynthesis Gene Families AT5G48930 25.296 1.97e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00980 - - pvy:116112663 362.073