Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00979 ATGGAGGTTTCAATACTCTCTGGCGAATTTCTCGTGCCGTCTTGCGGAAATCCTAAACACCCAAAGACACATATGTTGTCCTTCATAGACCAGTTTGTTCTGCCCAACCATGTGCCTATTTTGCTTTTCTACTCATTTGGTGCTGATGCAGTCACTCTTGAGAGCCATGCAGTCGATGATATTATCAAGAAAAGGTTGGAATCATTGAAGCAGTCACTATCCAAAACATTGGCAAGCTTTTATCCATTCGCTGGAAGATTTAGTGACGACAAGAACTCCATTGTCTGCTCTGACGAGGGTGTTTATTTTGTGGAAGCCAGTGCCAACTCTAATCTATCCAATTTTCTCCAAAGACCTGAGTTATTCCACAAGTTGTTACCAGCTGGTGCAACAGACAATGTTGCTTTGGTACAAGTGACCCGATTTACATGTGGTGGCATGTCGATCGGTGCTTTAGTTTCTCATAAAATAGTTGATGCTTGTTCATATAGTTTTTTTCTAAGAAGTTGGGCTGCCTCCACAAGTGATGATAGAGAGCCTTATCAGCTATCCACTCCAAATTTTGATGGTTCAAACTTTTTTCCACAAACTGATACTTCTCCAGATTTGACGGCTATGCTGTCGCCTTTCTTCAAAAGAGGAAGGTCAGCTACCAAGAGGTTTGTGTTTGATGCTGAAGCTATTGTTGCGCTTAAAGCTAAAGCATCCAGCTCCAACTGCAAGCGGAGCCCTTCTCGAGTTGAAGCTGTATCAGCTTTCATCTGTAAATCCATGGCAGCTGCAATGAAAGCTAGGTCTGGCAAACCCAAACCAATATATACAACACATGCAGTGAATATACGTCGCAGAGCAATGCCTTCACTTCCTGAATCATGCATGGGGAATTATATAGGCCTAGCACCTGCAGCTTTGGGCATCATAGGCCAGGATACTGAGCTCCTGGATTTGGTTATTAAAATTAGGGAAGAAATAACGAAGAAATATACATCTGATTTTGTAAAGAGTTCGCAAAGTGAGCCTGAAAAATTCTGGGAGATCCACAGAGAGATCGGCGAGGTTGCAGCTGGTACAGAGGTTGAATATATTGGATTCAATAGTTGGTGTAACATGGGCTTCTATGACGTTGACTTTGGATGGGGAAAACCGATGTGGATCGCAATTCAAGTAGTTTCAGACGATGTTAGCGATGATTACTTGATTAATGCTGTGTTTCTTACGGATACAAGATATAAAGATGAAGTTGAAGCCTGGATAAATATACACGCAGAAGAAATGGCTGTATTAGAACAAGACAAGGAATTCATTGCTTTTACTGCTTTCCGTCCAAAGTCCAAGAGTAGGCCATGA 1347 0.4202 MEVSILSGEFLVPSCGNPKHPKTHMLSFIDQFVLPNHVPILLFYSFGADAVTLESHAVDDIIKKRLESLKQSLSKTLASFYPFAGRFSDDKNSIVCSDEGVYFVEASANSNLSNFLQRPELFHKLLPAGATDNVALVQVTRFTCGGMSIGALVSHKIVDACSYSFFLRSWAASTSDDREPYQLSTPNFDGSNFFPQTDTSPDLTAMLSPFFKRGRSATKRFVFDAEAIVALKAKASSSNCKRSPSRVEAVSAFICKSMAAAMKARSGKPKPIYTTHAVNIRRRAMPSLPESCMGNYIGLAPAALGIIGQDTELLDLVIKIREEITKKYTSDFVKSSQSEPEKFWEIHREIGEVAAGTEVEYIGFNSWCNMGFYDVDFGWGKPMWIAIQVVSDDVSDDYLINAVFLTDTRYKDEVEAWINIHAEEMAVLEQDKEFIAFTAFRPKSKSRP* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00979 448 Gene3D - 215 437 IPR023213 -
Pte2g00979 448 Pfam Transferase family 2 434 - -
Pte2g00979 448 Gene3D - 1 205 IPR023213 -
Pte2g00979 448 PANTHER F21J9.9 4 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00979 Pte-Chr2 10279166 10280512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00979 67 386 Monolignol Biosynthesis Gene Families AT5G48930 26.966 1.20e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00979 - - tcc:18591690 342.428