Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00975 ATGGCGGCCGTAATCGTCACTGTCCAAACACCAATTCTCTTTAGGGGCACTTCGTCTTTCGCCTTCAACCAAACACTACAAGTTTCTCAGAGGAACTCATTCAAGGTTAATGCCTTTGCCAAGAAATGGGAACCCACCAAGGTCGTCCCGCAAGGTGATAGAGTTTTAGTTCGCCTGGAGGAATTATCTGAAAAATCTGCTGGTGGAGTTCTGTTGCCAAAGTCTGCAGTTAAGTTTGAAGCGTATCTCATGGGAGAAGTCCTTTCTGTTGGCACAGAAGTAAGTGAGGTTGAGGCTGGGAAAAAGGTTATTTTCTCAGACATGAATGCATACGAGGTGGATCTAGGAGAAGATGGGAAGCACTGCTTTTGTAAAGCAGGTGACTTGTTGGCTTTGGTCGAGTAG 405 0.4593 MAAVIVTVQTPILFRGTSSFAFNQTLQVSQRNSFKVNAFAKKWEPTKVVPQGDRVLVRLEELSEKSAGGVLLPKSAVKFEAYLMGEVLSVGTEVSEVEAGKKVIFSDMNAYEVDLGEDGKHCFCKAGDLLALVE* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00975 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 46 131 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte2g00975 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Pte2g00975 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte2g00975 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte2g00975 134 FunFam 10 kDa chaperonin 43 134 - -
Pte2g00975 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Pte2g00975 134 Pfam Chaperonin 10 Kd subunit 47 132 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00975 Pte-Chr2 10151072 10153818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00975 25 134 Calmodulin-binding Proteins AT5G20720 34.454 4.79e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00975 K04078 - qsa:O6P43_017151 195.282