Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00960 ATGGCTGCCTCCACAGTAGCTCTCTCCTCTCCATCGTTTGTTGGCAAGCCAGTGGGGCTTGGTCGATCCTCCCCGGACCTATGCACTTCAAGAATCACCATGAGGAAAGCGACCTCCAAGAGTGTCTCTTCGGGGAGCCCATGGTATGGGCCAGACCGAGTCAAGTATTTGGGCCCATTTTCCGGTGAACCCCCGTCCTACCTCACCGGAGAATTCCCCGGTGACTACGGATGGGATACTGCTGGGCTTTCAGCTGATCCAGAGACCTTTGCAAAGAACCGTGAGCTTGAAGTCATCCACTGCCGATGGGCCATGCTGGGTGCTCTAGGATGCGTTTTCCCGGAGCTCTTGGCCCGCAACGGTGTCAAATTCGGTGAGGCGGTGTGGTTCAAAGCTGGAGCCCAGATCTTCAGTGAGGGAGGACTTGACTACTTGGGCAACCCGAGTTTGGTCCATGCACAGAGCATTCTTGCTATCTGGGCCGTCCAGGTTATCTTGATGGGTGCAGTGGAGGGATACAGAATTGCAGGTGGACCGCTTGGTGAGGTGACCGACCCACTTTACCCAGGTGGAAGCTTTGACCCACTGGGTCTTGCGGATGATCCGGAGGCATTTGCCGAGTTGAAGGTGAAGGAAATCAAGAATGGTCGATTGGCCATGTTTTCCATGTTTGGTTTCTTTGTTCAGGCCATTGTGACTGGGAAGGGACCTATTGAAAACCTTGCCGACCATCTTGCTGACCCTGTCAACAACAACGCTTGGGCATATGCCACAAACTTTGTTCCTGGAAAGTGA 795 0.5396 MAASTVALSSPSFVGKPVGLGRSSPDLCTSRITMRKATSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00960 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Pte2g00960 264 FunFam Chlorophyll a-b binding protein, chloroplastic 55 257 - -
Pte2g00960 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Pte2g00960 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Pte2g00960 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00960 Pte-Chr2 9767440 9768689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00960 1 265 Chloroplast and Mitochondria Gene Families AT2G34430 86.142 1.91e-167 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00960 K08912 - jre:108990271 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00960 2 9767440 9768689 Pte2g00960 2 9767440 9768689 RCT
Pte2g00960 2 9767440 9768689 Pte19g01094 19 11425996 11427292 RCT