Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00954 ATGGAGTTTTCAGTTGTTTCGGAAGAATTCATTAAGCCTTCTCCTCCAACTCCTATCCACCTAAGGAATTATCAGATCTCCTTCTTAGATCAGCCCTTTCCGACCGCACATTCCGCAATTCTACTTTTCTATGCCGCTGAAGCAAGCACCTGTGCGATAGCTGATGATATGGTCAAACAAAGATTACTAATACTGAAGCAGTCTCTATCCACAATATTGGCTAGCTTTTTCCCCTTGGCTGGAAGAATTAGAGACAAGGTCTCCATTGATTGCAATGACGAGGGCCTCTATTATGTGGAGGCCAATGTCAACTCAAACCTATTGGAGTTTCTCAAACAACCAGAATCATCTGCAGGTGCTTCTTTTCTTCATAAATTGCTTCCTGGTGTAGCAAAAACAAGGACCTTAGAGTCTTCTCCGGCAAATGACGTTGCCATGATACAAGCAACAGCCTTTTCGTGTGGTGGCATCGCCATTTGTTTCTCAGTGTCTCATATGATAATGGATGCCATTTCAGGTCAAATTTTTTTAGAATGTTGGGCTGCTTCGGCTACTGGTGTTCCTAAATCAACAGTCCCAAATTTCAAAATTTCAACAAATTTTCCACAAATAGCTGCGTGCCCTGATTTTATGACTATTCTTGGTCCTTTTTTACAAAGAGGGAGGTGTGCCACGAAGAGGTTTGTGTTGGACGCCGAAGCTATAGCTGCGCTCAAAGCAAGAGCATCTATTTCCCACTTGCCCAACCCTTCTCGCGTTGAGGTTGTGTCTGCTTTCATATGCAAATCCGTTGCGGCCGCCTTGAATACCAAGTCAGGCACCTCCAAAGCAATATATACAGCGCATGCAGTGAATATACGCAGCAGAACAGTTCCTCCATTTGCAGAATCGTGCATGGGAAATTATGTGTGCATAGCACCTGTAGCATTGGGAATGGCAGAGAATTTGAAGCTTCCAGATTTGGTGTTAAAACTAAGAGAAGCTACAAAGCGCTACAATTCTGATTTTGTGAAGAGTTTGGAATATAAACCTGCAAAATACTTGGAGATTCTCAGAGAGATTGAAGGGGCTGCTTCTAGTGGTCAATTTGAATATCTTTATTTTTCCAGTTGGTGCAACGTGGGCTTTAATGACATTGACTTTGGATGGGGAAAGCCGTTGGGGATAGCATCCCAAGCTCCAACCAATTCTCTTGATGTTTTTATAAATGGTGTCATTCTTACGGACGACGCAAGATCAAGAGTGGGAATACAGGCTCACATAACGTTGGGGGAAGAAGTTATGAGAATATTAGAACAAGATAAAGAATGGAATGCTTTTGCTGCGTTAGATCCATATCCCATTGCTCTTTGCCAAAATGTGCCGCCAAAATGCAAGCGAGCTTCTCTATAG 1392 0.4282 MEFSVVSEEFIKPSPPTPIHLRNYQISFLDQPFPTAHSAILLFYAAEASTCAIADDMVKQRLLILKQSLSTILASFFPLAGRIRDKVSIDCNDEGLYYVEANVNSNLLEFLKQPESSAGASFLHKLLPGVAKTRTLESSPANDVAMIQATAFSCGGIAICFSVSHMIMDAISGQIFLECWAASATGVPKSTVPNFKISTNFPQIAACPDFMTILGPFLQRGRCATKRFVLDAEAIAALKARASISHLPNPSRVEVVSAFICKSVAAALNTKSGTSKAIYTAHAVNIRSRTVPPFAESCMGNYVCIAPVALGMAENLKLPDLVLKLREATKRYNSDFVKSLEYKPAKYLEILREIEGAASSGQFEYLYFSSWCNVGFNDIDFGWGKPLGIASQAPTNSLDVFINGVILTDDARSRVGIQAHITLGEEVMRILEQDKEWNAFAALDPYPIALCQNVPPKCKRASL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00954 463 Gene3D - 1 209 IPR023213 -
Pte2g00954 463 PANTHER F21J9.9 5 440 - -
Pte2g00954 463 Gene3D - 221 439 IPR023213 -
Pte2g00954 463 Pfam Transferase family 5 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00954 Pte-Chr2 9578407 9579798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00954 1 387 Monolignol Biosynthesis Gene Families AT5G48930 25.721 1.50e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00954 - - tcc:18591690 349.362