Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00949 ATGTCTGATGAACGCAAAGAACTTTACTACCAGGACCTTCATTTCCGTCAAAGTCATCAGCAGCAGCTAGTAGGTGGAAGATCGGCCATGTATGGACTTTCTTCATCAGCTTATAACTCACAGGTGTTTGAACCCTCATACACGACATTGACTGACTGTTTGCAAGGATCTATGGACTACAACTCGCTTGCAGCAGCTTTTGGAATGTCTCCTTCATCATCAGAAGTGTTTTCATCAGTGGAAGGTAATCAAAAGCCTGCAGAAGCTGGAGATGCAATGGGAAGTACTAGTGAGAATCATGCAACTCCAAACTCTTCGGTGATCTCTTCCTCTTCGTCTGAAGCTGGGGGTGAAGAAGATTCGGATAAAAGCAAGACGGATAACCAGATGACGAAAGGAGAAGATGGAGGAGAAAGCTCGAAGAAAGTCAGCAAGGGAAAGAAGAAAGGGGAGAAGAAGGAGAGAGAACCTAGGTTTGCATTCATGACAAAGAGCGAAGTTGACCATCTTGAAGATGGATATAGATGGAGAAAGTACGGACAGAAGGCTGTCAAGAATAGCCCTTATCCAAGAAGCTACTACAGGTGCACAACTCAGAAGTGTACAGTGAAGAAACGGGTTGAGAGGTCATTCCAAGATCCATCCATAGTGATAACAACATATGAGGGTCAACACAATCATCCAGTTCCCACATCACTTAGAGGGAATGCGGCTGCAATGTTCACACCTTCTATTCTAACACCGACGCCAATGCCAACTGGGTCAAGCTTTCCACAAGATTTGTTTATGCAGATGCCTCTCAATCACATGAGCAATATCAATCAAAGTGGAGTATCCTCCATCTATTCGCAAAACTTGGGATCTCTTCAACAGTACCAACTTCCTGATTATGGGTTATTGCAAGACATAGTTCCTTCTATGTTCCTTAAACAGGAGCCCTAA 942 0.4395 MSDERKELYYQDLHFRQSHQQQLVGGRSAMYGLSSSAYNSQVFEPSYTTLTDCLQGSMDYNSLAAAFGMSPSSSEVFSSVEGNQKPAEAGDAMGSTSENHATPNSSVISSSSSEAGGEEDSDKSKTDNQMTKGEDGGESSKKVSKGKKKGEKKEREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPSIVITTYEGQHNHPVPTSLRGNAAAMFTPSILTPTPMPTGSSFPQDLFMQMPLNHMSNINQSGVSSIYSQNLGSLQQYQLPDYGLLQDIVPSMFLKQEP* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00949 313 SMART WRKY_cls 170 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g00949 313 ProSiteProfiles WRKY domain profile. 165 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g00949 313 MobiDBLite consensus disorder prediction 95 115 - -
Pte2g00949 313 SUPERFAMILY WRKY DNA-binding domain 162 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte2g00949 313 Pfam WRKY DNA -binding domain 171 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g00949 313 FunFam WRKY transcription factor 57 156 230 - -
Pte2g00949 313 MobiDBLite consensus disorder prediction 116 159 - -
Pte2g00949 313 Gene3D WRKY domain 155 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte2g00949 313 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 265 IPR044810 GO:0003700
Pte2g00949 313 MobiDBLite consensus disorder prediction 73 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00949 Pte-Chr2 9480008 9482144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00949 43 314 WRKY Transcription Factor Family AT4G18170 54.035 9.75e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte2g00949 WRKY 3.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00949 - - qsu:111998523 379.022