Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00948 ATGTACTTGATTTTCAAAGAGAGTAATCTCTTAAGTACGACAAAGGGTAGAGACGAAAAGCATTCTGCACAATCACATATAATCCATGTGAAGAAAGGAAGAATAAGGATTAGGATAAAGGAGGCATTAGCCCTGGGAGTTGTAGTTCTTTGTATCGGAATTGGTGTTTTTGTTATGCATTATGTGGAGAATCTTGGATGGTTGGATTCCTTTTATCTCTCAGTGATGTCTGTTACCACAGTTGGTTATGGTGATCGAGCCTTCAAGTCGATGCCTGGTCGAATTTTTGCCTCAATCTGGTTGCTTGTATCAGCACTTGCTGTTGCACGAGCTTTCCTCTATTTTGCAGAGGCCAGAGTTGATAAGCTGCGCAGAAGGATGGTAAAATGGATTCTTGATCAAGATATGATTGTGTCTCAATTTTTTGCGGCTGACATAGACAACAAAGGGTCTGTGAGTAAGTCAGAATATGTCCTATACATGCTGAAGGAAATGAGGAAAGTATCAGACAAAGATATTATGCTGATATCTAAGAATTTTGATAGACTGGACAATGGCAATTGTGGAAAGCTTACTCTCACTGACCTTGTGGAGCATCAAAGTTAA 606 0.396 MYLIFKESNLLSTTKGRDEKHSAQSHIIHVKKGRIRIRIKEALALGVVVLCIGIGVFVMHYVENLGWLDSFYLSVMSVTTVGYGDRAFKSMPGRIFASIWLLVSALAVARAFLYFAEARVDKLRRRMVKWILDQDMIVSQFFAADIDNKGSVSKSEYVLYMLKEMRKVSDKDIMLISKNFDRLDNGNCGKLTLTDLVEHQS* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00948 201 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 24 174 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pte2g00948 201 Pfam Ion channel 47 117 IPR013099 -
Pte2g00948 201 SUPERFAMILY Voltage-gated potassium channels 28 138 - -
Pte2g00948 201 FunFam Two-pore potassium channel 3 24 138 - -
Pte2g00948 201 Gene3D - 21 136 - -
Pte2g00948 201 SUPERFAMILY EF-hand 127 197 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00948 Pte-Chr2 9469413 9470787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00948 3 201 Ion Channels AT4G18160 67.337 2.53e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00948 K05389 - cave:132168548 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00948 2 9469413 9470787 Pte2g00948 2 9469413 9470787 RCT
Pte2g00948 2 9469413 9470787 Pte19g01088 19 11253025 11257013 RCT