Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00937 ATGAAGCAATCTTTTGATTATTCATCTGCAGGAACTGATGTATTTCATGCCTCAACTGATGCTAGCCTTTTCTCGAGCTCACTGCCAGTTCTTCCTCATGAACAATTTGCAGTGAACACAAATGAAAATGGGTATTCCCATCAATCCGTGGACGACATGTCTTCTGATTTGGATAAGCTTCGTCAAGATGTGAATGGCAATGATCCTCTATATGAAGTTAAGTCTGGTCCTGTTGGAGCCTTACTTCCTGGTGATGAGAAGGAACTCTTATCTGGTATAATGGATGATTTTGACCTGAGTGGTTTGCCTGGTTCACTGGAAGACTTGGAAGATTATGACTTTTTTGGCAGCGGTGGAGGTATGGAGCTGGAAAGTGACACACAGGAAAGAATCAGTGTGGGTCTGTCACAGTTAAGTTTTTCAGACAATGTGGTTGGGTCTGGACTGTCTCATTTTTCTTTCTCAAATGGTGTGGGAACTGTTTCGGGAGAACATCCATATGGCGAACACCCTTCTAGAACCTTATTTGTTCGAAATATCAACAGCAATGTCGAGGATTCTGAATTAAGGGCACTTTTTGAGCAATATGGTGATATCAGGACGCTCTATACTGCATGCAAACATAGGGGATTTGTCATGATATCTTACTATGATATTCGTGCTGCCCGAACTGCTATGCGGGCATTGCAATACAAGCCACTGAGACGGAGGAAACTTGATATCCACTTCTCGATACCAAAGGATAATCCATCAGATAAGGATATCAATCAGGGGACCTTAGTTGTATTTAACCTGGATCCTTCAGTTACAAATGAAGATCTTCGTCAGATATTTGGTGCCTACGGCGAGGTCAAAGAGATAAGGGAAACACCACACAAAAGGCATCACAAATTTATTGAATTTTATGATGTTAGAGCTGCAGAAGCAGCACTTAAGTCTCTAAATAGGAGTGACATAGCTGGTAAGCGCATAAAGCTGGAACCTAGTCGACCTGGTGGAGCTCGTAGAAATTTGATGCTGCAATTGAATCAAGAGCTTGAGCAAGATGAATCCCGGAGTCTTCGCCACCAAGCTAGTTCACCACTAGCCAACTCTCCACCAGGCAACTGGTTACAGTTTGGCAGCCCAATCAAACATAATGCGTTGCAATCTGTCAGCAGATCTCCTGGTTATCGGAGCATGAGCCTAACAACTGGAAATCATTTACCCGGATTAGCCTCAATTTTACAGCCACAGGTTTCAGATGCTTTAAAGATTGCACCTATTGGCAAGGGCCAAGGAAGGAGTAGCCATGCAGAGAACATGTTTGCCAGTACAAACTCAGTCAATGGATTTCAGCATGCACATTCACTTCCTGAAGAAAAACATGGGCAATACGATGGAGCTATGTCCTCTTTTGGGCCTTCAGCTTCAAATGGATCTCCTGTGGAGACTCTGTCCGGACCACAATTTCTTTGGGGTAAACCGAAACCTTTCTCTGATCATGCCAAATTGTCAGCTTGGTCTAGACCTTCTTTGGGGTATCCATTTTCTTCAAATGGGAAGTCTCGTGCTTTCCCATACTCTGTTCAACATCCTTCCTTCGTCAATGCAGCCCAGTCCCATTACCACGTTGGATCTGCTCCATCCGGTGTCCCTCTTGAAAGGCATTTTGGTTTTTTCCCCGATTCACCTGAAACTTCACTGATGAATAATGTTCCATATCAAGGCATCGGTGCAGGAAATCACGATGGAAATTACATGGTAAATGTAGTTGGTGCTATGAACGCAGGCATTTGTATACCAGGGAATGTTTCTGAGAATGGTTCATCAAGTTTCAGGATGAGATCCCCTATGCTTAGTTCTGCATTTTTAGCAAATGGCACATACCCTGGAATTCCACCTATGGGAATAGATGGTTTTATGGAGCGTGGGCGAAGCAGACGAGTGGAGAATAGTGGAAACCAGGTTGATAACAAGAAACAGTTCCAGCTCGATTTGGATAAGATTAAGAAGGAAGAAGACGAAAGGACAACCTTAATGATAAAGAATATCCCAAATAAATATACATCAAAAATGTTGCTGGCTTCTATTGATGAAAATCACAGGGGGACTTATGATTTTCTTTATTTACCAATTGACTTTAAGAACAAGTGTAACGTGGGATATGCATTTATAAATATGCTCTCACCTTCTCTAATTATCCCCTTCTATGAGACATTTAATGGCAAAAAGTGGGAGAAGTTTAATAGTGAAAAAGTTGCCTCATTAGCATATGCTCGGATACAGGGAAAGGCAGCACTTGTAAATCACTTCCAGAATTCCAGCCTGATGAATGAAGATAAACGTTGCCGTCCTATTGTTTTTCATTCAGATTGTCCGGAAGCAGGTGATCAGGTACTTTCAAGATCAGCCGTGCAAATGAGATTGTGGTCCTTTTTTTTCTGA 2427 0.4236 MKQSFDYSSAGTDVFHASTDASLFSSSLPVLPHEQFAVNTNENGYSHQSVDDMSSDLDKLRQDVNGNDPLYEVKSGPVGALLPGDEKELLSGIMDDFDLSGLPGSLEDLEDYDFFGSGGGMELESDTQERISVGLSQLSFSDNVVGSGLSHFSFSNGVGTVSGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQYKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVTNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRSLRHQASSPLANSPPGNWLQFGSPIKHNALQSVSRSPGYRSMSLTTGNHLPGLASILQPQVSDALKIAPIGKGQGRSSHAENMFASTNSVNGFQHAHSLPEEKHGQYDGAMSSFGPSASNGSPVETLSGPQFLWGKPKPFSDHAKLSAWSRPSLGYPFSSNGKSRAFPYSVQHPSFVNAAQSHYHVGSAPSGVPLERHFGFFPDSPETSLMNNVPYQGIGAGNHDGNYMVNVVGAMNAGICIPGNVSENGSSSFRMRSPMLSSAFLANGTYPGIPPMGIDGFMERGRSRRVENSGNQVDNKKQFQLDLDKIKKEEDERTTLMIKNIPNKYTSKMLLASIDENHRGTYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFYETFNGKKWEKFNSEKVASLAYARIQGKAALVNHFQNSSLMNEDKRCRPIVFHSDCPEAGDQVLSRSAVQMRLWSFFF* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00937 808 CDD RRM2_MEI2_like 257 327 - -
Pte2g00937 808 MobiDBLite consensus disorder prediction 345 375 - -
Pte2g00937 808 FunFam MEI2-like protein 5 isoform 2 162 256 - -
Pte2g00937 808 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 173 246 IPR000504 GO:0003723
Pte2g00937 808 FunFam Protein MEI2-like 1 257 352 - -
Pte2g00937 808 CDD RRM3_MEI2_like 673 758 IPR034454 -
Pte2g00937 808 CDD RRM1_MEI2_like 172 248 IPR034453 -
Pte2g00937 808 MobiDBLite consensus disorder prediction 355 375 - -
Pte2g00937 808 Gene3D - 161 256 IPR012677 -
Pte2g00937 808 MobiDBLite consensus disorder prediction 455 480 - -
Pte2g00937 808 SUPERFAMILY RNA-binding domain, RBD 672 757 IPR035979 GO:0003676
Pte2g00937 808 Gene3D - 257 356 IPR012677 -
Pte2g00937 808 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 260 325 IPR000504 GO:0003723
Pte2g00937 808 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 175 239 IPR000504 GO:0003723
Pte2g00937 808 SMART rrm1_1 259 327 IPR000504 GO:0003723
Pte2g00937 808 SMART rrm1_1 672 748 IPR000504 GO:0003723
Pte2g00937 808 SMART rrm1_1 174 242 IPR000504 GO:0003723
Pte2g00937 808 SUPERFAMILY RNA-binding domain, RBD 170 333 IPR035979 GO:0003676
Pte2g00937 808 MobiDBLite consensus disorder prediction 464 479 - -
Pte2g00937 808 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 258 331 IPR000504 GO:0003723
Pte2g00937 808 PANTHER RNA RECOGNITION MOTIF-CONTAINING 92 784 - -
Pte2g00937 808 Pfam RNA recognition motif 2 670 766 IPR007201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00937 Pte-Chr2 9265265 9271080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00937 168 366 Eukaryotic Initiation Factors Gene Family AT1G71770 25.778 1.66e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00937 - - gmx:100800877 1195.26