Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00918 ATGGATGAAGGTCAAGGTGGTTCAAGTTCCCTGCCTCCATTCCTTACGAAGACTTACGAAATGGTGGACGATTCTTCTACAGATTCAGTTGTTTCCTGGAGCGGAAGCAGTAAAAGCTTCATCGTGTGGAATCCACCCGAGTTCTCTAGGGATTTACTTCCAAGATACTTTAAGCACAATAATTTCTCAAGTTTCATCAGACAGCTCAACACATATGTCGTTCTTGGGATGAGGCTTGGCCAAGGTGTTGACATGGTTGAGAAACCTAGTTCTAGAAGTGTGAAGGGAGGAAAAGTGAAAAGGAACAAAGGGAAAGAAAGGAGCTATTTTGGCTCACTTATGGAAGATGGTGTTGGTGAAGGGAGGGTGGAGAGACCTCCCACGTGA 387 0.4496 MDEGQGGSSSLPPFLTKTYEMVDDSSTDSVVSWSGSSKSFIVWNPPEFSRDLLPRYFKHNNFSSFIRQLNTYVVLGMRLGQGVDMVEKPSSRSVKGGKVKRNKGKERSYFGSLMEDGVGEGRVERPPT* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00918 128 Pfam HSF-type DNA-binding 14 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte2g00918 128 SMART hsfneu3 10 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte2g00918 128 Gene3D - 7 112 IPR036388 -
Pte2g00918 128 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 4 72 IPR027725 -
Pte2g00918 128 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte2g00918 128 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte2g00918 128 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte2g00918 128 FunFam Heat stress transcription factor B-4 7 82 - -
Pte2g00918 128 SUPERFAMILY "Winged helix" DNA-binding domain 9 73 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00918 Pte-Chr2 8518299 8523675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00918 8 72 HSF AT1G32330 73.846 1.83e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte2g00918 HSF_DNA-bind 4.3e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00918 K09419 - qsu:111991746 121.709