Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00913 ATGCACGCGAAATCCACACTGTTCTTGGTGCTGACCAGCTTGGTTCTCTTGGCAGCAGCAGCCATCAAAATTGATACAAAAGCTACTGGACGCCTTGTTCAAGACGAAGTGGAAGCACTAGAGGAAATTGCACGACAATTGGGAAAAACTGACTGGAATTTCGAAGCAGATCCCTGCAGTAACGACACCAGCTGGAATACACCTCTTTCAGGGTTAAGACCTTTATACAACAATTCACTTGTCTGCAATTGTTCCTTTGCTGGAGGCGTATGCCATGTTACTAAAATTTTCCTTAGAGGGCAGGATCTTCAAGGTTCGCTTCCATCTTCTCTACAAAAGCTACCGTACCTCACAGCAATTGACTTCAACATGAACTACCTCAATGGGACCATACCCACAGGTTGGACTTCCTTACAACTGTACTATCTGGTTCTCAGTGCTAACAAATTAACTGGATCAATTCCATCCTTCTTGGGAATCATGACAAACCTTGTGTACTTGTCCATGGAAGATAACATGTTTTCTGGAACCATTCCACCTGAGTTAGGAAAATTGGTTAACTTGCAGATGCTAATCCTTAGTGCTAACAATCTCAAGGGGGAGTTGCCAGAAGATCTTGCTAATCTGAAAAGCTTAACAGAACTTAGGATAAGTAGTAACAACTTAGGTGGAAAGATTCCGAGCTTTATTGGATCTTGGAAACAGATCCAAATGCTAGAAATGCAAGGCAGTGGTCTTGAAGGACCTATTCCAGCAAGCGTTTCTGTACTATCTAATTTGATCGAACTAAGAATTAGTGACTTGAATGGAGGGATATCAGAATTCCCATCCTTAAAGAATATGAAGAACATGACAAGACTGATGTTGAGGAGCTGCAATATTTCTGGAGTTATACCTTCCTATCTGTCAGACATGTCAAACCTAATGGCTCTGGACCTGAGCTTCAACAGATTGACTGGAAACATACCCGATCTCTCTGGTATTGATCATTTGCAGTACATTTATCTGACAAGCAACTTGCTGACTGGATCAATTCCTGACTGGATTAAGAGTAGAGATACTCGTTATAATATAGATCTTTCTTATAATAATTTCTCCAACAGCTCTCCACCTGCATGTAGAGAAACTCTAAATTTGTTCAAAAGCTTTCATAATTGGGAAAACTCAGTGAAGGGTACATGCTTGATGGGCTTTCAATGTTCTGAAGTGAAATATGCATTGCATATAAATTGTGGTGGTAAGGAAACCACCATTGAAAAGATCAAGTATGAGGCAGATCAAGACCCAGGTGGAATGTCCAAATTTAATCCTGGAGTTAGCACGTGGGGGATAAGTACAACCGGTTATTTCTGGGATTCCAATAGTACCTCAAACGACTTTGTAGCAAATAACAAATCAGTACTCACCATGGAAAATTCTGAATTATACACCAGTTCACGTCTGTCTCCTCTTTCTTTAACTTACTATGCACATTGCTTGGAAAATGGGAATTACAGTGTGAAACTTCACTTTGCTGAGATTGTGATTAGAGACAACAGATCTTACCAGAGTCTTGGAAGAAGAGTTTTTGATGTTTATGTCCAGGACCAATTGGTTTCGAAAGCTTTCAATGTGAAACAGGCAGCACATGGGGCCGATAAAGCAACTATTCTAGAATTTACAGCTACCGTGCAGAGCAATACTTTGGCAATTCGATTTCATTGGGCAGGGAAAGGGACAACAGACACTCCCAAGAGAGGGACATATGGTCCTCTTGTGTCAGCTATCTCCATTGAATCTGATTTCAGTCCACCGCACAGACCCAATAGAAAAGTTATTGCCACTATCTCTGCAGTCATCTTGGTCCTAGTTGTTTCCATGATTTTTGGTATTCTTCGGTGGAAAGGTTATATAGGACAAAAAGCATCAAGAGAAGAAGACTTGAGAGGGTTAGATCTGCAAACTGGAATCTTTACTTTCAGACAGATTAAAGCTGCCACAAATGATTTTGATGCAGCGAATAAGCTCGGGGAAGGTGGTTTTGGATCTGTTTATAAGGGAACACAGTCAGATGGCACCATGATAGCCGTGAAACAACTTTCTTCTAGGTCGAAGCAGGGAAATCGCGAATTCATCAATGAAATCGGCATGATTTCTGGTTTAAGACACCCAAACCTTGTCAGATTATATGGATGTTGTGTTGAAGGAAAACAATTATTATTGGTGTATGAGTTCTTGGAAAACAACAATCTTGGACGTGCTTTGTTAGCTGGTGACATGAAATTGGATTGGTCAACGAGGCAGAAGATATGTATTGGCATAGCTAAAGGTCTTGCTTTTCTTCATGAAGAATCAACAATAAAAATTGTCCACAGAGACATCAAGGCTACGAACGTGCTGCTGGATAAGGACCTTAACCCCAAAATTTCAGACTTTGGTTTGGCCAAGCTGGATGATGAGGAGAAGACACATGTTACCACCAGGGTTGCTGGAACAATAGGTTACATGGCACCGGAGTATGCAATGTGGGGTTATTTAACAGACAAAGTTGATGTCTATAGTTTTGGGGTTTTAGCTTTGGAAATAGTAGCAGGCAAGAACATGAGATATCAACCAGACCAGGACTTTGTATGTCTGTTAGATTGGGCTCTTTTCTTACAGCAAAAGGGAGATCTGATGGATCTGGTAGATCCCAATATGGGATCCAATTTCAACAAGGAAGAAGCAATACGAATGGTCAAAGTAGCTCTACTATGCACACATCCTTCACCGGCGCTAAGACCAAAAATGTCTGCTGTAGTGACTATGCTACAAGGCACCGTGGCAATTCCTGAAGTAATCTATGATCCAAGCATGTATCGTGATGGTACAAGTTTGACAGCCTTGAAAGGTCAAATCCATAAAAAGGAGAGCACTAGCAGTAGCAATAGTGAAACTGAAAACCTCATTCGTCCATCACAATCCACATGGTCCGGCTCTTCATCTAGAAGGCTATCAAGATCTCTTTCCAACACAGTCTAG 3000 0.412 MHAKSTLFLVLTSLVLLAAAAIKIDTKATGRLVQDEVEALEEIARQLGKTDWNFEADPCSNDTSWNTPLSGLRPLYNNSLVCNCSFAGGVCHVTKIFLRGQDLQGSLPSSLQKLPYLTAIDFNMNYLNGTIPTGWTSLQLYYLVLSANKLTGSIPSFLGIMTNLVYLSMEDNMFSGTIPPELGKLVNLQMLILSANNLKGELPEDLANLKSLTELRISSNNLGGKIPSFIGSWKQIQMLEMQGSGLEGPIPASVSVLSNLIELRISDLNGGISEFPSLKNMKNMTRLMLRSCNISGVIPSYLSDMSNLMALDLSFNRLTGNIPDLSGIDHLQYIYLTSNLLTGSIPDWIKSRDTRYNIDLSYNNFSNSSPPACRETLNLFKSFHNWENSVKGTCLMGFQCSEVKYALHINCGGKETTIEKIKYEADQDPGGMSKFNPGVSTWGISTTGYFWDSNSTSNDFVANNKSVLTMENSELYTSSRLSPLSLTYYAHCLENGNYSVKLHFAEIVIRDNRSYQSLGRRVFDVYVQDQLVSKAFNVKQAAHGADKATILEFTATVQSNTLAIRFHWAGKGTTDTPKRGTYGPLVSAISIESDFSPPHRPNRKVIATISAVILVLVVSMIFGILRWKGYIGQKASREEDLRGLDLQTGIFTFRQIKAATNDFDAANKLGEGGFGSVYKGTQSDGTMIAVKQLSSRSKQGNREFINEIGMISGLRHPNLVRLYGCCVEGKQLLLVYEFLENNNLGRALLAGDMKLDWSTRQKICIGIAKGLAFLHEESTIKIVHRDIKATNVLLDKDLNPKISDFGLAKLDDEEKTHVTTRVAGTIGYMAPEYAMWGYLTDKVDVYSFGVLALEIVAGKNMRYQPDQDFVCLLDWALFLQQKGDLMDLVDPNMGSNFNKEEAIRMVKVALLCTHPSPALRPKMSAVVTMLQGTVAIPEVIYDPSMYRDGTSLTALKGQIHKKESTSSSNSETENLIRPSQSTWSGSSSRRLSRSLSNTV* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00913 999 SUPERFAMILY Protein kinase-like (PK-like) 647 954 IPR011009 -
Pte2g00913 999 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 632 738 - -
Pte2g00913 999 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 203 269 - -
Pte2g00913 999 Gene3D Transferase(Phosphotransferase) domain 1 739 938 - -
Pte2g00913 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Pte2g00913 999 Gene3D Phosphorylase Kinase; domain 1 631 738 - -
Pte2g00913 999 SMART serkin_6 663 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00913 999 Gene3D Ribonuclease Inhibitor 36 200 IPR032675 -
Pte2g00913 999 ProSitePatterns Protein kinases ATP-binding region signature. 669 691 IPR017441 GO:0005524
Pte2g00913 999 ProSiteProfiles Leucine-rich repeat profile. 307 329 IPR001611 GO:0005515
Pte2g00913 999 Gene3D - 402 594 - -
Pte2g00913 999 Gene3D Ribonuclease Inhibitor 271 394 IPR032675 -
Pte2g00913 999 CDD STKc_IRAK 669 932 - -
Pte2g00913 999 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 275 396 - -
Pte2g00913 999 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 38 202 - -
Pte2g00913 999 ProSiteProfiles Protein kinase domain profile. 663 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00913 999 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 594 - -
Pte2g00913 999 SUPERFAMILY L domain-like 71 396 - -
Pte2g00913 999 Pfam Protein tyrosine and serine/threonine kinase 666 929 IPR001245 GO:0004672|GO:0006468
Pte2g00913 999 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 968 - -
Pte2g00913 999 Gene3D Ribonuclease Inhibitor 201 270 IPR032675 -
Pte2g00913 999 Pfam Leucine rich repeat 283 341 IPR001611 GO:0005515
Pte2g00913 999 MobiDBLite consensus disorder prediction 957 999 - -
Pte2g00913 999 FunFam Putative LRR receptor-like serine/threonine-protein kinase 739 942 - -
Pte2g00913 999 Pfam Malectin domain 406 589 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00913 Pte-Chr2 8472451 8481957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00913 7 985 Receptor kinase-like Gene Family AT1G53440 48.040 0.0 896
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte2g00913 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00913 - - qsa:O6P43_032039 1306.58