Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00895 ATGACAATATTTAAAGATGACCCATCCATCTCTGCTCGTCTCTTCCTTCCAAAATCGACCTCATCCTGCAATAGCACTCAACAGACGAAGCTTCCCATCTTGGTCTACTATCACGGTGGTGGGTTCTGCATTGACTCAGCATTCTCGTTTGTTTGGCATCGGTACCTGAACTATCTGGTGTCCGAAGCAAATGTCATCGCTGTTTCTGTGGACTACAGGCTTGCCCCAGAGCATCCTCTCCCTGCGGCATATGGCGATTCCTGGGTTGCTCTTCAATGGGTTGCGTCTCATTCAGCTGATAATCATAGTCCCATCCACTCTGAACCATGGTTAATCAATCATGGCCATTTCGACAGAGTTTATCTCGGGGGTGATAGTGCAGGTGGCAACATCGTACACAATATGGCTCTTCGTGCTGGGGTTGAGAAGCTTCCTGGTGATGTGAAAATATTAGGTGCTTTTCAATCTCATACTTACTTTTGGAGTTCAAATCCCATTGGATCTGAACCTGTTGAAGGGCACGACCAGAGTTTTCCCCTGCAGGTCTGGATGTTTGTGTACCCATCTGCCCCCGGTGGGATAGACAACCCATTGGTCAATCCAGTGTCACCTGGGGCTCCAAGCTTGGCAGGACTGGCATGTTCGAAACTTCTTGTTACAATTTCTGGGGAGGATTTTCTGAGGGAAAGAGGAGTGATGTACTATGAAGCTGTGAGGAGGAGTGGTTGGCAAGGGGAGCTGGAGCTTTTCGAAATTGAGGAAGAAAAACATTGTTTCCAACTCTCCTTCCCTGAATGGCTGAATCTGACAGTGGCTAGAAGCAAAGAGAAGAGGCTCCTACGAGAAACAATGTTGAATAAATGTTTGGTTTCTAGTATATCAATTATCCTCGTTGTAGGTATTACTCTCGGTATTGTTGTCATGCACTTCCACGACAAGAAAACAGACAGTAATATCTCAGCATCTAACAAGCATGCTCTACAATCTGGCATCAACCATCACCTGCAGTTGGTGGACACATCTTACAAGTTATCAGTTGAGAACAAAGACAATGCAGTCCTTAAGCTGAACTTTGGAGATTGCAATGAGCTGCTCCAGTTCGCGGTGGAAGACTTCCAAACTGTCTTAACCTCTGTGAAAGACAATAATTCTAGCACCTTGGAAGACCAAAAAGGAGAACTCATAAATCGTTTGAGTGCCGTGGTAGCTTTCCAGGAAACTTGTCTGGATATCTTTGCAGATAGTCGGTATCCTCTCAAGGATTTGGATATGTATACTGCAAGAAAGCTCATCCATCTGGCTCTTGAATTGATTGACAGAAGTGCTGACATTCTTACAGCATTTGGCTTGAAGCTAAATGCAAAACCTGCCTCTCGACGTCTTTTATTTACGGAAGGCCAAGGATATCCCACATGGATTTCTTCGTCTGATCGTAAGCTTTTGGCCGAAGCCCTCCCAAGTGCAACCCCACCCAATGAAGCTGTAGGTGGAATCGTACCTGATGTCATTGTGGCTAAGGACGGCAGTGGCCAATTTCTGACAATCGGTGAGGCTCTTCTTGCTTACCCAAAGGAGCCGGTGAACAAATTCATCATCTACGTGAAGGAAGGAGTGTATGATGAATACATCACCATTGCAAAAAACTTGAAAAGCATATACATGTATGGTGATGGCCCCAGAAAGACAATTGTCACCGGCAACAAAAGCCGCATAAGTGGAGTACAGAACACTTGGAGGACTGCAAGTTTCTCTGTAGTGGGTGATGGCTTCATGTGCAAGGATATGGGGTTCGAGAACACAGCTGGTCCGGAAGGAGAGCAGGCGGTAGCACTCCGCGTGCAATCAAATCACGCGGGTTTCTTCAATTGCAGGATCGATGGTTTTCAAGATACTTTGTATCTCCACGCTCACAGGAGTTTCTTTCGCGACTGTGTGATCACCGGCACCATCGACTTCATCTTTGGTGACTCTGCAACCGTAATACAAAACTCTCAAATCGTTGTGAGAAAGCCCGGACCCAAACAATCCAACACCGTCACAGCACAAGGTCGAGTTGACAATATCTCAAACAGTGCTTTGGTAATACAGAATTGCAGTATCATCCCAGAAGAGCAATTGATCCCAGAAAGATTTGTTATCCCTTCCTACTTGGGTAGGCCATGGAAGAACCTTTCGACGACCATCGTCATGGAATCCTTCATCGGTGACTTCATTAGAGCTGAAGGATGGTTACCTTGGAATGGTAATGATCACCTGGACACCTTGTACTATGGCGAGTATGCAAATGTTGGACCTGGTGCTGACACATCGAAGAGGGTTGAATGGAAGGGTTACCATGTTATCGGCAAGGAACAGGCCCGACGTTTTACTGTATCATTTGTATTGCTAGATGTTATTTCTTATTGGATTCAGGCAACTGGTTTTCCATACAATCCTGATTTGACTTCCTAA 2451 0.457 MTIFKDDPSISARLFLPKSTSSCNSTQQTKLPILVYYHGGGFCIDSAFSFVWHRYLNYLVSEANVIAVSVDYRLAPEHPLPAAYGDSWVALQWVASHSADNHSPIHSEPWLINHGHFDRVYLGGDSAGGNIVHNMALRAGVEKLPGDVKILGAFQSHTYFWSSNPIGSEPVEGHDQSFPLQVWMFVYPSAPGGIDNPLVNPVSPGAPSLAGLACSKLLVTISGEDFLRERGVMYYEAVRRSGWQGELELFEIEEEKHCFQLSFPEWLNLTVARSKEKRLLRETMLNKCLVSSISIILVVGITLGIVVMHFHDKKTDSNISASNKHALQSGINHHLQLVDTSYKLSVENKDNAVLKLNFGDCNELLQFAVEDFQTVLTSVKDNNSSTLEDQKGELINRLSAVVAFQETCLDIFADSRYPLKDLDMYTARKLIHLALELIDRSADILTAFGLKLNAKPASRRLLFTEGQGYPTWISSSDRKLLAEALPSATPPNEAVGGIVPDVIVAKDGSGQFLTIGEALLAYPKEPVNKFIIYVKEGVYDEYITIAKNLKSIYMYGDGPRKTIVTGNKSRISGVQNTWRTASFSVVGDGFMCKDMGFENTAGPEGEQAVALRVQSNHAGFFNCRIDGFQDTLYLHAHRSFFRDCVITGTIDFIFGDSATVIQNSQIVVRKPGPKQSNTVTAQGRVDNISNSALVIQNCSIIPEEQLIPERFVIPSYLGRPWKNLSTTIVMESFIGDFIRAEGWLPWNGNDHLDTLYYGEYANVGPGADTSKRVEWKGYHVIGKEQARRFTVSFVLLDVISYWIQATGFPYNPDLTS* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00895 816 SUPERFAMILY Pectin lyase-like 501 812 IPR011050 -
Pte2g00895 816 FunFam Pectinesterase 496 814 - -
Pte2g00895 816 Pfam Pectinesterase 501 792 IPR000070 GO:0030599|GO:0042545
Pte2g00895 816 ProSitePatterns Pectinesterase signature 1. 526 545 IPR018040 -
Pte2g00895 816 Pfam alpha/beta hydrolase fold 34 260 IPR013094 GO:0016787
Pte2g00895 816 SUPERFAMILY alpha/beta-Hydrolases 6 281 IPR029058 -
Pte2g00895 816 Gene3D alpha/beta hydrolase 1 273 IPR029058 -
Pte2g00895 816 Gene3D - 498 816 IPR012334 -
Pte2g00895 816 CDD PMEI-like_3 324 440 - -
Pte2g00895 816 Gene3D Invertase/pectin methylesterase inhibitor family protein 308 440 IPR035513 -
Pte2g00895 816 ProSitePatterns Pectinesterase signature 2. 646 655 IPR033131 -
Pte2g00895 816 PANTHER PECTINESTERASE 316 804 - -
Pte2g00895 816 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 342 435 IPR035513 -
Pte2g00895 816 Pfam Plant invertase/pectin methylesterase inhibitor 350 435 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00895 Pte-Chr2 8302334 8306223 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00895 361 810 Carbohydrate Esterase AT5G49180 43.107 3.31e-121 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00895 K01051 - jre:108981763 496.508