Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00889 ATGTTGAATAAATGTTTGGTTTCTAGTATATCAATTATCCTCGTCGTAGGTATTACTCTCGGTATTGTTGTCATGCACTTCCACGACAGGAAAACAGACAGTAATATCTCAGCATCTAACAAGGTCGTGGAGACGATTTGCTCCAAATCTGATGACAAAAGATTCTGCCAGGACACACTTAGGCAAGCCAATGACAGCAATGATCCAATGGACTATATCAAGCATGCTCTACAATCTGGCATCAACCATCACCTGCAGTTGGTGGACACATCTTACAAGTTATCAGTTGAGAACAAAGACAATGCAGTCCTTAAGCTGAACTTTGGAGATTGCAATGAGCTGCTCCAGTTCGCGGTGGAAGACTTCCAAACTGTCTTAACCTCTGTGAAAGACAATAATTCTAGCACCTTGGAAGACCAAAAAGGAGAACTCATAAATCGTTTGAGTGCCGTGGTAGCTTTCCAGGAAACTTGTCTGGATATCTTCGCAGATAGTCGGTATCCTCTCAAGGATTTGGATATGTATACTGCAAGAAAGCTCATCCATCTCGCTCTTGAATTGATTGACAGAAGTGCTGACATCTTTTCAGCATTTGGCTTGAAGCTAAATGCAAAACCTGCCTCTCGACGTCTTTTATTTACGGAAGACCAAGGATATCCCACATGGATTTCTTCGTGTGATCGTAAGCTTTTGGTCGAAGCCCTCCCAAGTGCAACCCCACCCAATGAAGCTGTCGGTGGAATTGTACCTGATGTCGTTGTGGCTAAGGACGGCAGTGGCCAATTTCTGACAATCGGTGAGGCTCTTCTTGCTTACCCAAAGGAGCCGGTGAACAAATTCATCATCTACGTGAAGGAAGGAGTGTATGATGAGTACATCACCATTGCAAAAAACTTGAAAAGCATATACATGTATGGTGATGGCCCCAGAAAGACAATTGTCACCGGCAACAAAAGCCGCATAAGTGGAGTACAGAACACTTGGAGGACTGCAAGTTTCTCTGTAGTGGGTGATGGCTTCATGTGCAAGGATATGGGGTTCGAGAACACAGCTGGTCCCGTAGGAGAGCAGGCAGTAGCACTCCGCGTGCAATCAAATCACGCGGCTTTCTTCAATTGCAGGATCGATGGTTTTCAAGATACTTTGTATCTCCACGCTCACAGGAGTTTCTTTCGCGACTGTGTGATCACCGGCACCATCGACTTCATCTTTGGTGACTCTGCAACCGTAATACAAAACTCTCAAATCGTTGTGAGAAAGCCCGGACCCAAACAATCCAACACCGTCACAGCACAAGGTCGAGTTGACAATATCGCAAACAGTGCTTTGGTAATACAGAATTGCAGTATCATCCCAGAGGAGCAATTGATCCCAGAAAGATTTGTTATCCCTTCCTACTTGGGTAGGCCATGGAAGAACCTTTCGACGACCATCGTCATGGAATCCTTCATCGGTGACTTCATTAGAGCTGAAGGGTGGTTACCTTGGAATGGTAATGATCACCTGGACACCTTGTACTATGGCGAGTATGCAAATGTTGGACCTGGTGCTGACACATCGAAGAGGGTTGAATGGAAGGGTTACCATGTTATCGGCAAGGAACAGGCCCGACGTTTTACTGTATCATTTGTATTGCTAGATGTTATTTCTTATTGGATTCAGGCAACTGGTTTTCCGTACAATCCTGATTTTACTTCCTAA 1701 0.448 MLNKCLVSSISIILVVGITLGIVVMHFHDRKTDSNISASNKVVETICSKSDDKRFCQDTLRQANDSNDPMDYIKHALQSGINHHLQLVDTSYKLSVENKDNAVLKLNFGDCNELLQFAVEDFQTVLTSVKDNNSSTLEDQKGELINRLSAVVAFQETCLDIFADSRYPLKDLDMYTARKLIHLALELIDRSADIFSAFGLKLNAKPASRRLLFTEDQGYPTWISSCDRKLLVEALPSATPPNEAVGGIVPDVVVAKDGSGQFLTIGEALLAYPKEPVNKFIIYVKEGVYDEYITIAKNLKSIYMYGDGPRKTIVTGNKSRISGVQNTWRTASFSVVGDGFMCKDMGFENTAGPVGEQAVALRVQSNHAAFFNCRIDGFQDTLYLHAHRSFFRDCVITGTIDFIFGDSATVIQNSQIVVRKPGPKQSNTVTAQGRVDNIANSALVIQNCSIIPEEQLIPERFVIPSYLGRPWKNLSTTIVMESFIGDFIRAEGWLPWNGNDHLDTLYYGEYANVGPGADTSKRVEWKGYHVIGKEQARRFTVSFVLLDVISYWIQATGFPYNPDFTS* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00889 566 FunFam Pectinesterase 246 564 - -
Pte2g00889 566 PANTHER PECTINESTERASE 16 554 - -
Pte2g00889 566 Pfam Plant invertase/pectin methylesterase inhibitor 42 185 IPR006501 GO:0004857
Pte2g00889 566 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Pte2g00889 566 Pfam Pectinesterase 251 542 IPR000070 GO:0030599|GO:0042545
Pte2g00889 566 SUPERFAMILY Pectin lyase-like 250 561 IPR011050 -
Pte2g00889 566 ProSitePatterns Pectinesterase signature 1. 276 295 IPR018040 -
Pte2g00889 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 190 IPR035513 -
Pte2g00889 566 NCBIfam pectinesterase inhibitor domain 18 168 IPR006501 GO:0004857
Pte2g00889 566 Gene3D - 248 566 IPR012334 -
Pte2g00889 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 185 IPR035513 -
Pte2g00889 566 CDD PMEI-like_3 45 190 - -
Pte2g00889 566 SMART PMEI_2 38 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00889 Pte-Chr2 8264786 8266622 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00889 4 564 Carbohydrate Esterase AT5G49180 38.793 1.28e-133 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00889 K01051 - jre:108981763 529.635