Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00884 ATGGAGAAGAGCGGAGGGATACTGATGCACAAGTTTGAGCTCGGTAAGCTCCTTGGCAAAGGGACATTTGCAAAGGTGTACCGTGCACGGAATATAAACACAGGTCAAAGTGTTGCCATTAAGGTAATTAACAAGGCGAAAGCTTTGAGGGTTGGTTTGACTGATCAAATCAAGCGAGAAATCTCGGTGATGAGCCTTGTTAAACATAGGAACGTTGTGCAGCTTTATGAGGTCATGGCCAGCAAAACCAAGATATATTTTGTGATGGAGTATGTGAAAGGTGGAGAGCTTTTCAACAAGGTTGCCAAAGGAAGGCTGAATGAAGATCTAGCGAGAAGATATTTCCGGCAACTAATCGATGCAGTAGATTTCTGTCATAGCAGGGGGGTCTATCATCGTGATCTTAAGCCTGAAAATCTTCTGCTTGATGAGGAAGGCAATCTCAAAATTTCAGATTTTGGATTGAGTGCCTTGTGGGATTCTAGGAGGAACGATGGGCTTCTCCATACATCTTGTGGAACTCCAGCTTATGTAGCTCCAGAAGTACTCACCAATAAGGGTTATGATGGAGCAAAAGCAGACATATGGTCATGTGGGGTTATTCTCTATGTGCTCTTGGCTGGTAAGCTTCCTTTCAATGATCCAAGTCTCATTGAAATGTATAGAAAGATTAGCAAAGGAGAATTCAAGTGCCCCAAATGGTTTCCAACTGATGTGAGAAGGCTTTTGTTGAGAATCATTGACCCTAACCCTAATAGAAGAATCGTCATTTCTAAGGTCAAGGAGAATGGCTGGTTTAGAAAGGGATGCGATAATAAATTCCACCTAGATGGGGATGAATATAATGAGACTAATGATAGCAAGAAGATGGAGACAGAAACAGCATGCACGCCAGCAAGTTTCAATGCCTTTGACATAATCACACTTTCACGAGGCTTTGACCTATCTGGTTTGTTTGAGGAAGATTTGGATAACAGACCAAGGTCTAGGTTTATAACAAAAGAACCAACCTCATTGATTGTGTCGAAATTTGAAGAGTTAGCGAGAATGGACAAGTTTAAGATGAAGATGAAAAACGGGACACTCAAACTGGAGAGAAGAGATGAAGGAAGAAAAGATCAACTTGGTATTGAAGCTGAGATATTTGAAGTGGCTCCGTCATTCTATGTTGTAGAGGTGGAAAAAACAGCTGGTGACACAATTGACTTCAAAATTTTCAATGAGCAAGATCTGAGACCCTCTCTTAAGGATATAGTATGGACGTGGCAATGA 1272 0.4143 MEKSGGILMHKFELGKLLGKGTFAKVYRARNINTGQSVAIKVINKAKALRVGLTDQIKREISVMSLVKHRNVVQLYEVMASKTKIYFVMEYVKGGELFNKVAKGRLNEDLARRYFRQLIDAVDFCHSRGVYHRDLKPENLLLDEEGNLKISDFGLSALWDSRRNDGLLHTSCGTPAYVAPEVLTNKGYDGAKADIWSCGVILYVLLAGKLPFNDPSLIEMYRKISKGEFKCPKWFPTDVRRLLLRIIDPNPNRRIVISKVKENGWFRKGCDNKFHLDGDEYNETNDSKKMETETACTPASFNAFDIITLSRGFDLSGLFEEDLDNRPRSRFITKEPTSLIVSKFEELARMDKFKMKMKNGTLKLERRDEGRKDQLGIEAEIFEVAPSFYVVEVEKTAGDTIDFKIFNEQDLRPSLKDIVWTWQ* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00884 423 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Pte2g00884 423 Gene3D Transferase(Phosphotransferase) domain 1 94 272 - -
Pte2g00884 423 CDD CIPK_C 302 416 - -
Pte2g00884 423 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Pte2g00884 423 Gene3D Phosphorylase Kinase; domain 1 8 93 - -
Pte2g00884 423 Gene3D Kinase associated domain 1, KA1 296 421 - -
Pte2g00884 423 Pfam NAF domain 298 356 IPR004041 GO:0007165
Pte2g00884 423 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00884 423 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Pte2g00884 423 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00884 423 Pfam Protein kinase domain 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00884 423 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Pte2g00884 423 FunFam Non-specific serine/threonine protein kinase 6 301 - -
Pte2g00884 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pte2g00884 423 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 415 - -
Pte2g00884 423 FunFam Non-specific serine/threonine protein kinase 296 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00884 Pte-Chr2 8188071 8190062 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00884 1 423 CBL-interacting serine-threonine protein kinases AT5G45820 63.466 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte2g00884 Pkinase 3.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00884 K07198 - mof:131144417 611.298