Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00882 ATGGCCGACAACGTTGTAAACACCAACAAGAAAGAAAACCCATCTGTGCTTTTGGGTCGTTTTGAGTTTGGGAAGCTCCTTGGTCATGGTACTTTTGCAAAAGTCTACCTAGCCCGCAACATCAAAACGGGTGACAGTGTTGCCATCAAGGTCATAGACAAAGAGAAAATCCTAAAGGGTGGTCTAATGGTTCACATCAAGCGTGAGATCTCGATCCTTCGCCGTGTCCGCCACCCCAACATTGTTCAATTGTTCGAGGTCATGGCTACAAAATCAAAGATCTACTTTATCATGGAATACGTACGTGGTGGTGAGCTATTCAACAAGGTCGCAAAAGGTAGGTTGAAGGAGGAATATGCTAGAAAATATTTCCAGCAATTGATTTCAGCCGTTAGTTTTTGTCACGCAAGAGGGGTATACCATAGGGATTTAAAGCCTGAAAATTTGTTGCTTGACGATAATGGTGATTTGAAAGTGTCTGATTTTGGTCTGAGTGCTGTCTCTGATCAAATTAGGCAAGATGGTTTGTTTCACACCTTTTGCGGTACTCCTGCTTATGTTGCTCCTGAGGTTTTGGCAAGAAAAGGGTATGATGCTGCGAAGGTCGATATTTGGTCTTGTGGGGTAATCTTATTTGTTTTAATGGCAGGGCATTTACCTTTCCATGATCAGAATATTATGGCTATGTATAGGAAGATTTACAAGGGCGAATTTCGTTGTCCTAGATGGTTTTCACCTGAGTTGATTAAGCTTCTTAAAAGGCTTCTAGATACAAACCCGGATTCCAGGATTACAATTCCTGAGATTATGGAGACTAAGTGGTTCAAAAAAGGGTTTAAACATATAAAGTTTTACGTTGAGGATGACAAGGTTTGTTCTGTCCAGGAAAATGAAGATGATACTGAAGATGATACAGATTCCTTGCATGACCATTCAATGTGTGAATCTGATTCTGAGATAGAAACAAGGAGGAGAGTTTGTCCGCTTCCAAGGCCTGCAAGTTTGAATGCATTTGATATTATATCATTTTCACGAGGTTTCGATCTTTCGGGGTTGTTTGAGGAAGGTGGAGATGAGGCCAGGTTTGTGACCAGTGCGCCTGTGTCGAAGATTATATCCAAATTGGAGGGAATAGCGAAAGATGTTAGCTTTAATGTGAGGAAGAAGGATTGCAGAGTTAGTATGGAAGGGTCACGAGAAGGTGTAAAGGGCCCATTGACGATTGCTGCAGAGATATTCGAATTGACACCGACTTTGGTCGTGGTGGAGGTTAAGAGGAAAGGAGGAGATAAAGGAGAGTATGAGAAGTTCTGTAGCGAAGAACTGAAGCCTGGCTTGCACAAGTTGATGATGGAGGAATCAGCTGCTTCTTCACATTCACCTGCACCTTCAGACACTGAATAG 1404 0.4231 MADNVVNTNKKENPSVLLGRFEFGKLLGHGTFAKVYLARNIKTGDSVAIKVIDKEKILKGGLMVHIKREISILRRVRHPNIVQLFEVMATKSKIYFIMEYVRGGELFNKVAKGRLKEEYARKYFQQLISAVSFCHARGVYHRDLKPENLLLDDNGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDAAKVDIWSCGVILFVLMAGHLPFHDQNIMAMYRKIYKGEFRCPRWFSPELIKLLKRLLDTNPDSRITIPEIMETKWFKKGFKHIKFYVEDDKVCSVQENEDDTEDDTDSLHDHSMCESDSEIETRRRVCPLPRPASLNAFDIISFSRGFDLSGLFEEGGDEARFVTSAPVSKIISKLEGIAKDVSFNVRKKDCRVSMEGSREGVKGPLTIAAEIFELTPTLVVVEVKRKGGDKGEYEKFCSEELKPGLHKLMMEESAASSHSPAPSDTE* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00882 467 CDD STKc_SnRK3 20 274 - -
Pte2g00882 467 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 443 - -
Pte2g00882 467 SUPERFAMILY Protein kinase-like (PK-like) 12 283 IPR011009 -
Pte2g00882 467 Pfam Protein kinase domain 22 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00882 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Pte2g00882 467 CDD CIPK_C 336 446 - -
Pte2g00882 467 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Pte2g00882 467 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00882 467 Gene3D Kinase associated domain 1, KA1 332 452 - -
Pte2g00882 467 Pfam NAF domain 332 388 IPR004041 GO:0007165
Pte2g00882 467 FunFam Non-specific serine/threonine protein kinase 332 450 - -
Pte2g00882 467 Gene3D Transferase(Phosphotransferase) domain 1 11 326 - -
Pte2g00882 467 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Pte2g00882 467 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00882 467 FunFam Non-specific serine/threonine protein kinase 11 317 - -
Pte2g00882 467 ProSiteProfiles NAF domain profile. 330 354 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00882 Pte-Chr2 8170457 8172584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00882 15 468 CBL-interacting serine-threonine protein kinases AT4G18700 76.858 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte2g00882 Pkinase 8.4e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00882 - - qsa:O6P43_031947 771.155