Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00878 ATGGTCTTAAAACTTAGACGAATCCTTGCTTACTCACCAGGGCAGGTTCCACTTCAGTCTTCTAGATCAACCTTTGATCCTAGTAAGTCTAATGGTGGAGGGCAAATGCCAGTGCAGCCATCTTCGTCAAAAAACCATTTCATAACAAAATTTACACAAGAACAAAAGGAGAAGATGATGGAATTCACCAGCAAGCTGGGGTGGACGATCCAGAAACATGACGAGGAGGAAGTGCGGCAGTTTTGTTCTCTAGTCGACGTAAAAACATGTTTTGAAGGTCTGGATGCACAATAA 294 0.4286 MVLKLRRILAYSPGQVPLQSSRSTFDPSKSNGGGQMPVQPSSSKNHFITKFTQEQKEKMMEFTSKLGWTIQKHDEEEVRQFCSLVDVKTCFEGLDAQ* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00878 97 MobiDBLite consensus disorder prediction 16 44 - -
Pte2g00878 97 SUPERFAMILY Homeodomain-like 31 88 IPR009057 -
Pte2g00878 97 Gene3D - 28 91 - -
Pte2g00878 97 NCBIfam homeobox domain, ZF-HD class 44 88 IPR006455 -
Pte2g00878 97 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 30 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00878 Pte-Chr2 8064763 8066745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00878 35 88 ZF-HD Transcription Factor Family AT1G75240 55.556 7.97e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00878 - - jre:108987183 88.5817