Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00875 ATGTCTAAATCTTCATCTACTACTTCTTGGGTTCTAGCCTACGTAAAGCTTCAGTTCTTTTCTCGGATCAGAACGTTTCTACAATCCAAAGCAAAGCAGAAGCGAAGTAGGCCATCTGATAGATTAGAGAAAGTTGAAAATAACATGAAGGAGCCATCATCACAAGCTGTACAAGCAGTCAGCAAACAAGTGTGCTATGAAGAGCAGACTGCAGCGTTGCAGAAATCTGTGAAGAAACTTCACTTTGGCAGCTGGGAAGAAAAGGAGATGGCTGCCAAAGAGATTGAAAGGTTGGCTATGGAAGATGTAAAGATGAAGAAGCTGATGACAGAGTTAGGAGTCATACCTGTGCTGGTTTCCTTGGTGGCCTCAGAAGTTCCCTGCAGACAACGGGCTGCTGTCAAAGCTTTGATTAAGCTTGCTGATGGAACGTACATGAACAAGGCTTTGATGGTAGAGGCAGGAATCTTATCCAAACTACCGAACAAAGCTGACCTCTTAGATGAGCAAACAAGAAGTGAATTTGCAGAACTGCTATTGTCATTATCATCTCTAGCTAACACCCAATTAATTCTCTCTTCATCAGATTTCCTACCAAGTCTTTCCACCATTCTTGAGTCAAGTTCAAGCTTTGGAACAAAAGAACTTTGTGTTGAAGCATTGTACAACCTCTCAACTGTGTTAGACAATGCAGGACCTTTGGTTTCTAATGGGCTTGTAGATATCCTCTTGAGACTGTCCTCAATAAATGAAATCTCAGAGAAAGCCCTAGCAACATTAGGCAACTTGGTGGTGACATTAATGGGGAAGAGAGCAATTGAAAACAGTTCAATGGTGCCTGAGAAATTGATAGAGATTTTGGCATGGGAGGATAAACAAAAATGTCAAGAACTATCTGCTTACATCCTAATGATTCTAGCTCATCAGAGTTCAGCGCAAAGAGAAAAAATGGCTCAGTCAGGAATTATCAATGTGCTCCTTGAGGTGTCACTGCTTGGGAGTCCATTAGCTCAGAAGAGAGCATGGAAGCTATTGCAGTGGTTCAAAGATGAAAGGGAAGCAAGAATGAAGCCACACTCTGGACCCCAGATAGCTAGAGTTCCAATTGGCTCACCTGTTCATAAAAAAGAAGCACAAGAAGGAAGGAGAATGATGAGGAGTTTAGTGAAACAAAGTCTGCATAGGAATATGGAAACAATAACCAAGAGAGCACAGGCTGATGGAGATGCTTCTAATCTAAAAGCATTGATCATCAGCACTAGTTCAAAGAGTTTGCCATATTAG 1284 0.4167 MSKSSSTTSWVLAYVKLQFFSRIRTFLQSKAKQKRSRPSDRLEKVENNMKEPSSQAVQAVSKQVCYEEQTAALQKSVKKLHFGSWEEKEMAAKEIERLAMEDVKMKKLMTELGVIPVLVSLVASEVPCRQRAAVKALIKLADGTYMNKALMVEAGILSKLPNKADLLDEQTRSEFAELLLSLSSLANTQLILSSSDFLPSLSTILESSSSFGTKELCVEALYNLSTVLDNAGPLVSNGLVDILLRLSSINEISEKALATLGNLVVTLMGKRAIENSSMVPEKLIEILAWEDKQKCQELSAYILMILAHQSSAQREKMAQSGIINVLLEVSLLGSPLAQKRAWKLLQWFKDEREARMKPHSGPQIARVPIGSPVHKKEAQEGRRMMRSLVKQSLHRNMETITKRAQADGDASNLKALIISTSSKSLPY* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00875 427 SMART arm_5 144 184 IPR000225 GO:0005515
Pte2g00875 427 SMART arm_5 226 265 IPR000225 GO:0005515
Pte2g00875 427 SMART arm_5 102 142 IPR000225 GO:0005515
Pte2g00875 427 Gene3D - 44 359 IPR011989 -
Pte2g00875 427 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 427 - -
Pte2g00875 427 SUPERFAMILY ARM repeat 77 355 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00875 Pte-Chr2 8040435 8043076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00875 75 357 U-box Gene Family AT3G54790 31.579 7.23e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00875 - - qsa:O6P43_012757 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00875 2 8040435 8043076 Pte2g00875 2 8040435 8043076 RCT