Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00858 ATGGCTTCATCTAATAGACACTGGCCTAGCATGTTCAAGTCCAAGCCCTGCAACACTCACCACCAATGGCAGCATGACATCAACTCCTCCCTCATGTCTTCTGGGTGCCATAGAAGCCCATACACTACAGGCTGTGAAGATCGAAGTCCAGACCCAAAGCCTAGATGGAATCCCAAACCAGAGCAAATTCGCATATTGGAAGCGATATTTAACTCTGGCATGGTGAACCCTCCAAGGGATGAGATAAGAAAGATCAGGTCGCAGCTGCAAGAATACGGACAAGTGGGTGATGCCAATGTTTTCTACTGGTTCCAGAACCGTAAATCTAGAAGCAAGCACAAGCTTCGTCACCTCCAAAACTCTAAGAATCAAGGGCAACAAATTCAAAGCATTAATATATCATCTTCATCCACAGTTGCATGTCAGTCCACTGCCACTGCTATAGTACCTTCGTCTTCGTCTTCTTCTTCTGAGAAATCGTCACCTAAAACTTCATCTGCACACACTAAAAAGTACTCGGTAGGATTCTCTAGAATTCCTGAGTCTACGTCAAACACTTCAACTGCCTCGATAAACCAGTCTAGCTATTTTTCATGCTATAATGAGTCAAGTCTGCCAGTTGATCCCTTCTTCTTCCCGATGCAACACACAGATGGGGTGGTGCAACATACAGGAACTGCAAATTTAACTCAAGGACTTTGCTTCTCTGAGCTTTCAAATGTTGTTCCAGTGCCTCAACATATCGTTGGCCCTTGTACCAGTCTCCTGCTTAGTGAAATAATGAATCATGGAGCCTCAAAGAAAGGAGATCCAGAAGAGAGAACTTTAAAAATGCACCACCCTAATCAGCTTAGCTTTTTAGTTCCCACTACCACTCCTAGCCCTCACTCTCATGTGTCTGCCATCTCTACAAGCACTGTCACAAATCCATCCTACATCTCTCATATTGGAGTTTGCCTCATCGTCTTCCAGTTCGATACTGTTAATGATGACCATTTCGTTAGATGTGAAGATTTTGATGCTTCCCATGTAGGTGCTGGTGAACCCACAATTTTGGGTCCAAGTCCTCCTAGTTCAACCAAATCTACGGTGTTTATCAATGATGTGGTTTTTGATGTACCTGTGGGGCCATTCGATGTTCGAGAGGCTTTTGGTGTGGACGCTGTTTTAATTAACTCTTCTGGTCAGCCAGTTCTCACCAATGAATGGGGAGTCACACTTCAGTCACTCCAACATGGAGCATCATATTACCTGGTGCCAACCTAA 1266 0.4439 MASSNRHWPSMFKSKPCNTHHQWQHDINSSLMSSGCHRSPYTTGCEDRSPDPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRSQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNSKNQGQQIQSINISSSSTVACQSTATAIVPSSSSSSSEKSSPKTSSAHTKKYSVGFSRIPESTSNTSTASINQSSYFSCYNESSLPVDPFFFPMQHTDGVVQHTGTANLTQGLCFSELSNVVPVPQHIVGPCTSLLLSEIMNHGASKKGDPEERTLKMHHPNQLSFLVPTTTPSPHSHVSAISTSTVTNPSYISHIGVCLIVFQFDTVNDDHFVRCEDFDASHVGAGEPTILGPSPPSSTKSTVFINDVVFDVPVGPFDVREAFGVDAVLINSSGQPVLTNEWGVTLQSLQHGASYYLVPT* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00858 421 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 419 IPR044557 GO:0003700|GO:0050793
Pte2g00858 421 CDD homeodomain 52 114 IPR001356 GO:0003677
Pte2g00858 421 FunFam WUSCHEL-related homeobox 11 53 120 - -
Pte2g00858 421 MobiDBLite consensus disorder prediction 150 172 - -
Pte2g00858 421 SUPERFAMILY Homeodomain-like 49 117 IPR009057 -
Pte2g00858 421 Gene3D - 53 119 - -
Pte2g00858 421 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Pte2g00858 421 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Pte2g00858 421 SMART HOX_1 51 118 IPR001356 GO:0003677
Pte2g00858 421 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00858 Pte-Chr2 7760374 7762333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00858 358 419 Wox Gene Family AT2G33880 58.065 4.19e-18 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte2g00858 Homeodomain 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00858 - - qsa:O6P43_012710 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00858 2 7760374 7762333 Pte2g00858 2 7760374 7762333 RCT