Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00856 ATGGTTGGATGCAAATTCAATGGCCCTATTCCCGATTCAATCGGATCTTTAAAAAAGTTGACCTTTCTAGCTCTGAACTCTAATGGTTTTAGCGGAAGGATCCCTCCAACTATTGGCAATCTCACCAATCTTAATTGGCTAGATCTTGCTGACAACCAACTCGAAGGACCTATCCCCATATCCAATAGCAATTCTCTTGGTTTGGATATGCTGGTTAACGCACAGCACTTTCATCTTGGAAACAATAAACTCTCGGGGGAAATTCCAGACAAGCTCTTCAGTTCAAATATGAGCTTGATTCATGTGCTCTTTGACAGCAACCAGCTAACTGGAACCATTCCCCAGACCTTAGGGCTTGTTAAGACCGTGGAAGTGCTGCGCTTGGATAAGAATCAATTGATTGGTAAAGTGCCTTCTAATATCAATAGGCTTTCTGCTCTCACGGATCTTTATTTGTCAAACAATAATTTGAATGGATCAATACCTGACCTAAGTGGCATGAACCAGCTCGTCTATGTGGACATGAGCAACAATACATTCAATGCTTCTACTATACCTTCATGGTTTTCAACCTTGCAGTCTATGACAACATTAATGATGGAGAACACAGGAATCCAAGGGCCAATTCCTGTTTCCCTTTTTAACCTTTCAAATATAGAGTCTATAGTATTGAGGAACAACAAGCTCAATGGTTCTCTGGACATCGGTGCTGCATACAGTAGCCAGTTACAACTTATAGATTTGCGGGGCAATTCAATTACTGATTTGAAGCAAAAAACAACCAATATTACAATAACACTGTTAGGGAACCCACTGTGTTTGGAAACAGGAGTATCATCCCAAAGTTACTGCCAAGACACGAAACCAACTTACTCATACACAACGCCATCTAAATGTGGAACGGTTCCTTGCAATTCCAATCAGATTGTCAGTCCTAATTGTAAATGTTCATATCCATACACAGGGACTTTGTTCTTCAGGGCTCTTGGCTTTTCCAACTATGATAACTCAAGTTACTATGTTGCTCTTCAGCAGTCTCTCATGAAAACTTTTCAGTCCCAACATAACCTACCTGTGGATTCAGTTGCACTCATAAATCCTTTCAAGAATGATGTTGAATACTTTGGAATGACCCTTGAAGTTTTCCCTTCCCAAGTAGATCGTTTTAACAGAACAGCAGTATCGACTATGGCTTTTATTCTCAGCAACCAGATCTTGAAACCTCCAGGAGTTTTTTCACCTTACTACTACATCGGCAACAATTATGAAAACTTTGCAGGAGAACTGTCAAAATCATCAAAATCATCAAACGCAGGAGTTATAATTGGTGCGGTAGCCGGTGGTGCCATTCTTCTGCTATTACTAGTTCTTCTGGGGGTGTATGCATACCGGAAAAAGAGAAGAACTGAACAATTTATGGAATCGAACCCTTTTGCGCACTGGAACACAGAAAACAACAATGGCAATGCTCCTCAGTTAAAAGCTGCGAGATGGTTTTCATTTGAAGAGCTTAAGAAATACACCAATAATTTTTCAGACGTAAATGACATTGGAGCTGGGGGATATGGCAAGGTTTATAGTGCTACTCTTCCTACTGGTGAAGCAGTTGCCATTAAACGAGCTCGCCAAGAATCCATGCAAGGTACACATGAGTTCAAAACTGAGATTGAACTTCTCTCAAGAGTCCATCACAAGAATCTTGTCAGTCTGCTAGGTTTCTGCTTCGAGAAAGGTGAACAAATTCTGGTATATGAGTACATCCCAAATGGTACCTTAATGGAGGCTATTTTAGGAAAATCTCAAATAAGATTGGATTGGGGCAGGAGGATAAGAGTTGCACTGGGAGCAGCTAGAGGCCTGTCCTATCTTCATGAACTTGCCAACCCACCTATCATACATAGAGATGTCAAATCAGGCAATATCCTACTTGACGAGCAGTTAAATGCAAAAGTTGCTGACTTTGGATTGTCCAAGCCTCTCACTGACACAGAAAGAACACATGTCACCACTCAAGTTAAAGGGACCATGGGATACATGGACCCTGAATATTATATGACAAACCAGTTGACTGATAAGAGTGATGTTTATAGCTTTGGAGTGGTTTTACTGGAGCTGGTTACAGGAAGAAAGCCTATAGAGAATGGAACATATATTGTGAGAGAGGTCTCGAATGCAATGGACCGATCCAAAAAACTGTACAACCTTCATGACGTTCTAGACCCATACATAAGGAAAGCAGACTTGAAAGGCTTAGAGAGATTTGTTGATGTAGCAATGAGATGCGTCAATGAGTCTGCATCAAAGAGGCCTTCAATGGCTGAGGTGGTAAAAGAAATGGAGGATATAATGCAGCTTATGGGGTTAACCCCTAGTAGTGTTGTTGAATCAACATCAACATCAGAAAAAAACTATAAGGTGGTATCTGCTGATGATAATGTCAAGGTTTTTCATCAGGATTTCAGTTACAGTGGGGGTTTCCCATCAAGAATGGTAGAACCTCATTGA 2505 0.408 MVGCKFNGPIPDSIGSLKKLTFLALNSNGFSGRIPPTIGNLTNLNWLDLADNQLEGPIPISNSNSLGLDMLVNAQHFHLGNNKLSGEIPDKLFSSNMSLIHVLFDSNQLTGTIPQTLGLVKTVEVLRLDKNQLIGKVPSNINRLSALTDLYLSNNNLNGSIPDLSGMNQLVYVDMSNNTFNASTIPSWFSTLQSMTTLMMENTGIQGPIPVSLFNLSNIESIVLRNNKLNGSLDIGAAYSSQLQLIDLRGNSITDLKQKTTNITITLLGNPLCLETGVSSQSYCQDTKPTYSYTTPSKCGTVPCNSNQIVSPNCKCSYPYTGTLFFRALGFSNYDNSSYYVALQQSLMKTFQSQHNLPVDSVALINPFKNDVEYFGMTLEVFPSQVDRFNRTAVSTMAFILSNQILKPPGVFSPYYYIGNNYENFAGELSKSSKSSNAGVIIGAVAGGAILLLLLVLLGVYAYRKKRRTEQFMESNPFAHWNTENNNGNAPQLKAARWFSFEELKKYTNNFSDVNDIGAGGYGKVYSATLPTGEAVAIKRARQESMQGTHEFKTEIELLSRVHHKNLVSLLGFCFEKGEQILVYEYIPNGTLMEAILGKSQIRLDWGRRIRVALGAARGLSYLHELANPPIIHRDVKSGNILLDEQLNAKVADFGLSKPLTDTERTHVTTQVKGTMGYMDPEYYMTNQLTDKSDVYSFGVVLLELVTGRKPIENGTYIVREVSNAMDRSKKLYNLHDVLDPYIRKADLKGLERFVDVAMRCVNESASKRPSMAEVVKEMEDIMQLMGLTPSSVVESTSTSEKNYKVVSADDNVKVFHQDFSYSGGFPSRMVEPH* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00856 834 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Pte2g00856 834 SUPERFAMILY L domain-like 3 254 - -
Pte2g00856 834 PANTHER RECEPTOR-LIKE PROTEIN 55 3 782 - -
Pte2g00856 834 Gene3D Phosphorylase Kinase; domain 1 481 586 - -
Pte2g00856 834 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 587 796 - -
Pte2g00856 834 Gene3D Single helix bin 429 468 - -
Pte2g00856 834 SUPERFAMILY Protein kinase-like (PK-like) 497 802 IPR011009 -
Pte2g00856 834 Gene3D Ribonuclease Inhibitor 164 302 IPR032675 -
Pte2g00856 834 Gene3D Ribonuclease Inhibitor 1 163 IPR032675 -
Pte2g00856 834 CDD STKc_IRAK 517 782 - -
Pte2g00856 834 Gene3D Transferase(Phosphotransferase) domain 1 587 798 - -
Pte2g00856 834 FunFam Leucine-rich repeat protein kinase family protein 478 586 - -
Pte2g00856 834 SMART serkin_6 511 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00856 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Pte2g00856 834 ProSiteProfiles Protein kinase domain profile. 511 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00856 834 ProSiteProfiles Leucine-rich repeat profile. 146 168 IPR001611 GO:0005515
Pte2g00856 834 Pfam Protein tyrosine and serine/threonine kinase 515 778 IPR001245 GO:0004672|GO:0006468
Pte2g00856 834 FunFam Leucine-rich repeat protein kinase family protein 64 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00856 Pte-Chr2 7708634 7713454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00856 1 835 Receptor kinase-like Gene Family AT5G49760 53.919 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pte2g00856 PK_Tyr_Ser-Thr 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00856 - - cit:102607213 1004.59