Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00849 ATGACATGGTGCAATGAGTCGCAGCAGCAGGAGGTGGAGGGAGAGAAGGAGAGGGCTGTTGATCATAATATTCGTGAACAGCTAAATATAGTTCCTATCTCTACTCTTGATGAGAAGAAAATCCCCGAAATGCAAATTGTAGCATGCCCTTCTTGTGATCACAGCATACAGATCCAAGATAAGGCTGGAATTCTTGATTTGCCAGGACTACCAGCTGGGGTGAAGTTTGATCCAAGTGACCCTGAGATCCTTGAGCATTTAGAGGCCAAAGTGCTCTGTGATGTTCCTAAGCTTCACCCTCTAATCGATGAGTTCATCCCTACACTTGAAGGAGAGAACGGAATTTGTTCTACTCACCCAGAAAAGCTACCAGGAGTACACAAAGATGGCCAAGTCCGTCACTTCTTCCATCGACCTTCAAAAGCATACACGACAGGAACAAGGAAACGAAGAAAGGTGCACACAGGTGATGAAGATGGAGGTGAAACAAGATGGCACAAGACAGGAAAGACAAGGCCAGTTTATGTTGGTGGTGCATTGAAGGGTTTCAAGAAAATCCTAGTCCTTTACACCAACTATGGTAGGCAACGTAAACCTGAGAAGACAAATTGGGTAATGCATCAATACCACATTGGAAGCAATGAAGAAGAGAAAGATGGTGAGCTAGTAGTTTCAAAAGTTTTCTATCAAACTCAGCCTAGACAATGTGGCGGCACAGCGATTAAGGACTCATTTGAGAAAAGATTAATGAACGATGGAAATAGTGTTGATGATTTTTCTATACCCAAAAATACAGCAGGTTTTATTCAGTACTATAATCCTTCTATCATTGTTGATCATGGAGTTCATGATAGAGAAAGCCCACCTAAGCTTATTCCCAATTTGGTTCGTCAAGGTGATGGGTCTTCATATATTCGTTTGTCCATGGATGCAAGCAAAGCAAGACTTGAAGGTAAATAG 960 0.4229 MTWCNESQQQEVEGEKERAVDHNIREQLNIVPISTLDEKKIPEMQIVACPSCDHSIQIQDKAGILDLPGLPAGVKFDPSDPEILEHLEAKVLCDVPKLHPLIDEFIPTLEGENGICSTHPEKLPGVHKDGQVRHFFHRPSKAYTTGTRKRRKVHTGDEDGGETRWHKTGKTRPVYVGGALKGFKKILVLYTNYGRQRKPEKTNWVMHQYHIGSNEEEKDGELVVSKVFYQTQPRQCGGTAIKDSFEKRLMNDGNSVDDFSIPKNTAGFIQYYNPSIIVDHGVHDRESPPKLIPNLVRQGDGSSYIRLSMDASKARLEGK* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00849 319 MobiDBLite consensus disorder prediction 143 166 - -
Pte2g00849 319 MobiDBLite consensus disorder prediction 150 166 - -
Pte2g00849 319 Gene3D NAC domain 79 234 IPR036093 GO:0003677|GO:0006355
Pte2g00849 319 SUPERFAMILY NAC domain 64 230 IPR036093 GO:0003677|GO:0006355
Pte2g00849 319 ProSiteProfiles NAC domain profile. 70 230 IPR003441 GO:0003677|GO:0006355
Pte2g00849 319 FunFam NAC domain-containing protein 73 79 234 - -
Pte2g00849 319 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 42 252 IPR044799 GO:0003700
Pte2g00849 319 Pfam No apical meristem (NAM) protein 71 211 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00849 Pte-Chr2 7633689 7636453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00849 1 315 NAC Transcription Factor Family AT1G28470 58.514 5.05e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte2g00849 NAM 3.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00849 - - jre:108979818 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00849 2 7633689 7636453 Pte2g00849 2 7633689 7636453 RCT
Pte19g00974 19 8555718 8558378 Pte2g00849 2 7633689 7636453 RCT