Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00848 ATGCCACCGCCATTGCCATCGCCACATCTTCACCTTCTCTTCTGCCTCTTCCTTCTCTGCACGCTGCCTTCATCAACTCTTTCTCTCAACCAAGAAGGTCTCTACCTTAACCAATTCAAGCTCTCTCTCGATGACCCATCTTCCTCACTTTCCTCGTGGAACGAACGTGATGACACCCCATGTAACTGGTTTGGTGTCCAATGTGATAACTTTACTCATTCCGTTACTACTATTGATCTCTCCAGTGCTAATGTCGCCGGTCCTCTTAACCCTTATCTTCTTTGCAGTTTAAACAATCTCACTTCTCTTACTTTGTTCAACAACTCCATCAACTCAACTCTTTCTCCCAATATCTCACTCTGTCAAAGCCTCTCCCATCTTGACCTCTCTCAAAATTTCCTTACTGGGTCTCTGCCACACACATTAGCTGACCTTCCTAACCTCAAGTACTTGGACTTGACTGGTAACAACTTCTCCGGCGATGTCCCCACTAGCTTTGAGAAGTTTCAGAAGCTGGAGGTGCTTTCCTTGGTGTATAATCTCTTAGACGGACCGGCTCCTGCTTTTCTCGCAAACATTTCGTCGCTCAAAATGCTGAACCTTTCCTACAACCCGTTTATACCGGGTCGGATTCCACCGGAGTTTGGGAATTTGACGAACCTTGAGGTTTTGTGGTTGACACAATGTAACTTCGTGGGGCCGATTCCTGAGTCTCTTGGGAACTTGAAACGGCTCAAAGATTTGGACTTGGCATTGAACAATCTCTATGGTTCAATTCCAAGTTCGCTAACGGAACTGACAAGTCTCGTACAGATTGAGTTGTATAATAACTCGCTGACCGGAGAGTTTCCACCGGGAATGTCGAAACTCACTGAATTGAGACTGCTTGACGCCTCCATGAACCAGTTGACTGGAAGTATTCCCGATGAGTTGTGCAGTTTGCCATTGGAGAGTCTCAACCTCTATGAGAACCGGTTTGAAGGTGAAGTGCCAGAGAGCATAGCCAATTCGCCTAACCTGTATGAACTCAGGTTATTCGGTAATAAGCTGCGCGGGAACTTACCCAAGAATCTCGGTAAGAATTCACCTTTGAAATGGCTTGACGTTTCTAGCAACCAGTTCTCAGGCGAGCTTCCGGCTACTCTGTGTGCTAATGGGCAGCTGGAGGAGTTGCTTGTGATATACAATTCTTTTAGCGGTGCTATTCCGGCAAGTCTAGGTGCGTGTCTGAGTTTGACCCGGGTCCGTCTCGGGCACAACCGATTTACCGGTGAGCTGCCAGTGGGCTTGTGGGGTCTGCCACATGTATATCTTCTTGAACTCATTGACAACTCATTTTCTGGGTCAATAGAAAAGACCATCGCCGGGGCCTCCAATCTCTCACAGTTGATAGTTTCAAAGAACAACTTCACAGGAACCATTCCAGAAGAGATTGGATGGTTGGAAAATCTGGTCGAGCTTTCTGCTAATGACAACAAGCTTAGTGGGTCTTTACCCCAGAGCATTGTGAATCTCGGGCAACTTGGGATTGTTAATCTTTGTAGCAATGAGCTTTCCGGTGAGCTACCACCCAAAATTCAGACATGGAAGAAGCTCAATGAACTAAATTTAGCTAATAACAAGTTTACAGGGAAAATACCAGAAGACATTGGGAGTTTGTCTGTGCTTAACTTTCTTGATCTGTCTAGAAATCAGTTCTTTGGAACAATACCCTTGTCTTTGCAGAACCTGAAGCTCAACCAACTCAATTTATCTTTCAATAAATTGTCTGGGGAACTTCCTCCTCAGTTTGCAAAGGTTATGTACCGCAACTGTTTCCTTGGTAATCCTGGCTTGTGTGGAGAGTTAGATGGTCTGTGCGATGGTGCTGGAGAAGCTAAGGTAATGGGTTATGTTTGGTTGTTTAGGGCTATTTTCATTGTTGCTGCTTCGGTGTTTGTTGTGGGTGTGGTTTGGTTTTACTTAAAATATAGGAACTTCAAGAGGGCAAAAAGAACCATTGACATGTCAAAATGGACATTGATGTCGTTTCACAAGCTGGGTTTTAGCGAGTATGAGATTTGCGATTGTCTTGATGAAGATAATGTGATCGGCTGTGGATCTTCTGGGAAAGTGTATAAAGTTGTGCTCAGCAATGGAGAGGTTGTGGCTGTCAAGAAACTCTGGGGTCGACCAAAAAAGGATATTGATAGTGGGGATATTGAGAAAGGTCAGGTTCAGGATGATACCTTCGATGCTGAGGTTGAAACATTGGGCAAAATTAGGCACAAAAACATTGTAAAGCTATGGTGTTGTTGTGCTACTAGAGACTGCAGGCTCTTGGTCTATGAGTACATGCCTAATGGCAGTTTGGGTGATCTGCTGCACGGTAGCAAGGGGGGATTGTTGGATTGGCCTACAAGATATAAGATAGCACTCGACGCAGCCGATGGACTATCCTATTTACATCACGATTGTGTTCCTCCAATTGTTCACAGAGATGTTAAAGCCAACAATATATTACTAGATGGAGACTTTGGGGCGAAGGTGGCTGATTTCGGAGTAGCTAAGGTGGTTGATGCTACTGGGAAAGGGACTAAATCTATGTCTGGCATAGCTGGTTCATGTGGATACATTGCTCCAGAATATGCATACACGCTGAGAGTTAATGAGAAGAGCGACATTTACAGTTTAGGTGTGGTATTCCTTGAGCTTGTAACTGGAAGACGCCCAGTAGACCCTGAGTTTGGTGAGAAGGATTTGGTGAAATGGGTATGCACCACCTTGGATCAGAAAGGTGTTGACCTTGTAATTGATCCTAAACTTGATTCTTGTTTCAAAGAAGAAATATGCAAGGTCCTCAAGATTGGTCTGTCCTGCACTAGTCCTCTCCCAATCAACCGTCCTTCAATGAGAAGAGTAGTGAAGCTGTTGCAAGAGGTGGGGGGAGGCAGCCTGTCCAAGACTGCCAAGAAAGATGGAAGACTCTCACCTTACTACTACGATGATGTCTCTGATCAGGGTAGTGTAGCTTAG 3015 0.4504 MPPPLPSPHLHLLFCLFLLCTLPSSTLSLNQEGLYLNQFKLSLDDPSSSLSSWNERDDTPCNWFGVQCDNFTHSVTTIDLSSANVAGPLNPYLLCSLNNLTSLTLFNNSINSTLSPNISLCQSLSHLDLSQNFLTGSLPHTLADLPNLKYLDLTGNNFSGDVPTSFEKFQKLEVLSLVYNLLDGPAPAFLANISSLKMLNLSYNPFIPGRIPPEFGNLTNLEVLWLTQCNFVGPIPESLGNLKRLKDLDLALNNLYGSIPSSLTELTSLVQIELYNNSLTGEFPPGMSKLTELRLLDASMNQLTGSIPDELCSLPLESLNLYENRFEGEVPESIANSPNLYELRLFGNKLRGNLPKNLGKNSPLKWLDVSSNQFSGELPATLCANGQLEELLVIYNSFSGAIPASLGACLSLTRVRLGHNRFTGELPVGLWGLPHVYLLELIDNSFSGSIEKTIAGASNLSQLIVSKNNFTGTIPEEIGWLENLVELSANDNKLSGSLPQSIVNLGQLGIVNLCSNELSGELPPKIQTWKKLNELNLANNKFTGKIPEDIGSLSVLNFLDLSRNQFFGTIPLSLQNLKLNQLNLSFNKLSGELPPQFAKVMYRNCFLGNPGLCGELDGLCDGAGEAKVMGYVWLFRAIFIVAASVFVVGVVWFYLKYRNFKRAKRTIDMSKWTLMSFHKLGFSEYEICDCLDEDNVIGCGSSGKVYKVVLSNGEVVAVKKLWGRPKKDIDSGDIEKGQVQDDTFDAEVETLGKIRHKNIVKLWCCCATRDCRLLVYEYMPNGSLGDLLHGSKGGLLDWPTRYKIALDAADGLSYLHHDCVPPIVHRDVKANNILLDGDFGAKVADFGVAKVVDATGKGTKSMSGIAGSCGYIAPEYAYTLRVNEKSDIYSLGVVFLELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDLVIDPKLDSCFKEEICKVLKIGLSCTSPLPINRPSMRRVVKLLQEVGGGSLSKTAKKDGRLSPYYYDDVSDQGSVA* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00848 1004 Gene3D Transferase(Phosphotransferase) domain 1 779 988 - -
Pte2g00848 1004 SUPERFAMILY L domain-like 387 604 - -
Pte2g00848 1004 FunFam Leucine-rich receptor-like protein kinase family protein 211 309 - -
Pte2g00848 1004 SMART serkin_6 691 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00848 1004 FunFam Receptor-like protein kinase HSL1 675 778 - -
Pte2g00848 1004 SUPERFAMILY L domain-like 189 451 - -
Pte2g00848 1004 Gene3D Ribonuclease Inhibitor 29 189 IPR032675 -
Pte2g00848 1004 SUPERFAMILY Protein kinase-like (PK-like) 677 971 IPR011009 -
Pte2g00848 1004 ProSiteProfiles Protein kinase domain profile. 691 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00848 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
Pte2g00848 1004 Pfam Leucine rich repeat 121 158 IPR001611 GO:0005515
Pte2g00848 1004 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Pte2g00848 1004 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 273 972 - -
Pte2g00848 1004 Gene3D Phosphorylase Kinase; domain 1 675 778 - -
Pte2g00848 1004 Pfam Protein kinase domain 693 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00848 1004 Gene3D Ribonuclease Inhibitor 194 266 IPR032675 -
Pte2g00848 1004 Gene3D Ribonuclease Inhibitor 267 337 IPR032675 -
Pte2g00848 1004 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 779 988 - -
Pte2g00848 1004 Gene3D Ribonuclease Inhibitor 338 621 IPR032675 -
Pte2g00848 1004 FunFam Receptor-like protein kinase HSL1 315 622 - -
Pte2g00848 1004 SUPERFAMILY L domain-like 30 206 - -
Pte2g00848 1004 SMART LRR_typ_2 242 266 IPR003591 -
Pte2g00848 1004 SMART LRR_typ_2 481 505 IPR003591 -
Pte2g00848 1004 SMART LRR_typ_2 193 217 IPR003591 -
Pte2g00848 1004 SMART LRR_typ_2 290 314 IPR003591 -
Pte2g00848 1004 SMART LRR_typ_2 97 121 IPR003591 -
Pte2g00848 1004 SMART LRR_typ_2 145 168 IPR003591 -
Pte2g00848 1004 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 29 193 - -
Pte2g00848 1004 ProSitePatterns Protein kinases ATP-binding region signature. 697 727 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00848 Pte-Chr2 7619265 7623002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00848 25 1005 Receptor kinase-like Gene Family AT1G28440 71.255 0.0 1428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte2g00848 Pkinase 4.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00848 - - qsa:O6P43_031880 1527.69