Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00845 ATGGATTCATCAGACGGAGAAAATTCGAGGAGAGATGGAAGTCTCGAGAAGGATGACGATGAGATTATTGGACGCAACATCAATAATAGTAAGATTGTAAATTCCAGCGAAGGACAGAGCAAACAAAAGCGTCAGATGAAAACACCGTATCAGCTGGAAGCTTTAGAGAAAGCTTATGCTTTAGAGACTTACCCAACAGAATCAACGAGGGCAGAGCTGTCGGATAAATTGGGATTGACGGATCGGCAGTTGCAGATGTGGTTTTGTCACAGGAGGTTAAGGGACAAGAAGGATTTGCCTTCAAAGAAACAGAAGAAGACACCTGCAGCTGTACTGGATTCTCCGGCAGACAACTTAAAGCCAGGACCCGAGTTTGGCAACGACTATGGGTCTGGTTCAGCTTCAGGTTTTAGCCCTATTGGTAGAGCTGGAGTATCTCGTGGTATGGCAAGGTATCGTAGATCTCCACCGTCTATATTGGAACTAAGAGCAGTTGCTTTTGTGGAGGCACAATTGGATGAACCATTGAGGAAAGATGGACCTATTCTAGGAATAGAGTTTGATCCATTGCCTCCTGATGCGTTTGGAGCTCCTTTAGAGCAGCAGAAGCGGCCTGGGCTTGCTGATGGTGCCAAGCTATTTGACCTGCATAATGTGAAGCCAAATAAGACTAGTGCAAGGGCTCTTCAAGAATACCAGTATTTTCAGAATCAACCAAGTATTAGGTCTGATATCTGTGGACAGTTACCCCAATCTCACTTACGTGATCCAATATTGGATGGTGATATTGCCAGGACTCCATCATATATGCCTGTTAATGAACTGCTACCAAGAGTTCATACTGAGAAAGGCCATTCTTCTCGCGTCCGTCATGTGTCTCAACAAGATAAACAGCAAATTGCCTGTTCATCACCTGCTCGAGATGATGACTATTTCCGCCGAAGGGATTCTGTTGCTATTACTGCAAACGTTGGAATGAATGCTCACTATAATGATCACCCAGTTGTTAAATCAGAATCATATGGCATATCAGCTGGCCAAACTTATCATATTGACACCATCTCTAACATGAATAGGAAACGGAAGGTTGAAGATACTAAAATTTCAAGAGAGGTCGAAGCCCATGAAATTAAGGTGCGGAAGGAGCTTGAGAAGCAAGATATTTTGAGGCAAAAGAATGAAGAAAGAATGAAGAAAGAAATAGAGAGACAAGACCGAGAAAGGAGAAAGGAAGAAGAGAGATTAGTTCGTGAAAGGCAGCGGGAGGAAGAAAGATTGAAGCGAGAGGAGAAACGTGAAACTGAAAGAAGGGAAAAACTGTTGTTGAAAGAACATCTACGGGCTGAAAAGATAAGACAAAAAGAAGAAATTCGAAAAGAGAAAGAGGCAGAAAGAAGAAAAGTCGCTCTTGAGAAAGCTACTGCTAGGAGATTAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAGCTAGAATTGATGGAATTAGCAGCTGCTAAAAAAGGAGTTTCTTCTATCATCCACCTCGATCTTGACGCGTTGCAAAACCTTGAATCTTTCCGGGATTCTCTGTGTTTGTTTCCACTGGGAAGTCTAAAGCTGAAAAAGCCATTTGCTATCCAGCCCTGGGTTAACTCTGACAAGAATACTAGCAACCTTCTAATGGTATGGAGGTTCTTGATTGCTTTTGCTGATGTTCTTGGAATATGGCCGTTCACTCTTGACGAGTTTATTCAAGCATTTCATGACTATGACTCAAGATTGTTGGGTGAAATACATGTTGCCCTTCTTAAGGTCATTATTAAAGATATTGAGGATGTAGCTAGGACACCTACTACTGTATTTGGAGCAAATCAGAATGGTGCTAATCTTGGGGGAGGACACCCTGAGATTGTTGAAGGGGCAAATGCGTGGGGCTTTGACATTCAAACTTGGCTGCAGCACTTAAACCCATTAACATGGCCTGAGATTCTTAGGCAACTGGCATTATCTGCTGGATTTGGACCGAGGTTAAAGAAACAAAGTACTGGGTGGCAAAATACTCAAGCTAAGGATGAGGTTCCAAATTGCGAAGACACAATCTCTACACTTCGTAATGGCACAGCAGCTGAAAAAGCTTTTGCAAAAATGCGGGAGAGAGGTCTATTGGCTCCTCCAAGATCAAGGCATCGCTTGACACCTGGAACTGTCAAGTTTGCAGCATTTCATGTTCTCTCACTGGAGGGGAGTGCGGGACTAAATGTATTAGATCTTGCTGAAAAAATTCAGAAATCTGGACTTAGGGACTTAACTTCAAGCAAGACACCTGAAGCATCAATTTCAGTAGCAATGTCTAGGGATGCTAAGCTTTTTGAGAGGATAGCTCCTTCAACATACCGTGTACGAGATGCATATAGAAAGGATCCTATTGATGCTGAGGTTATTCTGTCAGAAGCCCGAAAAAAAATCCAGATGTTTGAAAATGGGATCCAGCCAGGTGAAGATGTTGATGATGTTGAAAGGGATGAAGAATCAGAAAGTGACGGTGTTGATGAGGATCCTGAAGTGGATTTCTTGATTAATTCAAATGTTAATGAAATAGATGAACATCACGGAAACACAAGTACATGTTTAGGTAATGGAAAAGAGAATTTGAGCAATGAAATCGATTTAAATACCGAAACAGGATTTGAGAAGGATATCTCATTTTCTGTTAACGGCATTGAGAATATGGACTGCCTCAACACTGCAATCGAGCCACCTGTTGAAGATATCCCCACTAAGAACCTTGATCAATTTGGAATGGAAATTGATGAAAGTATATCTGGAGAGTCGTGGATTCAAGGGCTCACAGAAGGGGATTATTCTGTTCTCAGTGTAGAGGAGCGTCTAAATGCTCTTGTTGTTTTGATAGGAGTTGCAAATGAAGGACACTCAGTTCGAGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAGATGTGGGCTGAGGCACAATTAGATAAAAGATGCATCAAAGATGATATTTTAAATAAATTAGATACTCCATCTTTTTCTGGAAACAGAATTGAACCACAATATCCTGTGATGGAAGGAACCCAAAGCCCGCTACATAATGCCATCATTAGAACTAATGAGGAATCTCCGAGAACCTTGGAAAACCAAAAATTGATCTCAACTCCGCAATATGTTCAGAATCAACTTAGTCTCATTCCCTCGGAGAAGGGCTCATTCGCAGATATAAACTTAGGTTCAGATAATTTCCCAAGTCAGCAACTTGGATATGCTTCTAAAAGGTCACGTTCACAAATGAAGTCATACATTGCTCAGAAAGCAGAAGAGGTATACATATACAGGTCTTTGCCTCTTGGCCAAGATCGCAGACACAATCGCTATTGGCAGTTTATTACTTCTGCTTCAAGCAATGATCCTGGTGCTGGTCGTATATTCGTTGAATTGCAAGACCACAAGTGGAGGCTTATAGATTCTCAAGAAGACTTTGATATTCTTCTGAAGTCTCTGGATGCTCGTGGAATCAGGGAATCTCATTTGCTCTTGATGTTGCAGAAAATTGAGTCAACCTTCAAAGAAAATGTTAGAATTAGCTCACATTCTGCTAAATATTCTTGGCTGGATGGAGATTCTGTCAAAAACAAAGCTAATGGAATAGATTCTAGTCCTGATGAACACGCTGTTTTTGATAGTCCAAGCAGCATTATCAGTCGGTCAAATTCTGACGAACTGGAAACAGCATCATCATCTTTCAAAGTTGAGCTAGGTAGATATGATACTGAGAAGAAAGCTGCCGTGCAGAGGTACCAAGATTTTCAGAAATGGATGTGGAAACAATGCTACAGTCCATCAACCTTATGTGCAACAAAATATGGAAAAAAGAGAGGCAGGCTGCTGATGGAAATGTGCGATGTCTGTTTCAATTCATACTACTTTGAAAGATTCCATTGCCCTCATTGCCATCGGACTACCTCAATTACCAGGTCTAATTCCTCCAAACATGCATGTCAATGTGGAGAGAAGAAGCCAGATCCTCACGATACCCAAATATCAGGAGCTTCTCTTCCATTGCAAACTAGATTGTTGAAATCCTTATTAGCCAACATTGAGGTATCGGTTCCACTGGAAGCTTTTCATTCAATTTGGAAGGAAGAGTACAGAAAAGAGTGGGGTAAAAGGTTAAGCATGTCATCTTCGCCGAAAGAACTTCTGCAGATATTAACTCTACTTGAGAGAGCATTACAAAGAGAATATATATCGCCAAATTTCCACACAACAGAAGAATCATTGGAATTGTGTAGTATGCCAGCTTGTACCGCACAAAATTCCATTGATCTCGAATCTGTTCCTGTGATTCCATGGATTCCACAAACCATTGCAGCTTTGGCTCTCAGGCTGTTGGAGTTTGATGCTTCCATCAGTTACACACAACTTGAGAAACATGAGCCTGATGAGAACAAAGAAGCAAGAGGATACACAAAGCTTCCTTCAAGATATGCTGCCATGAAAACTGAAATAAAATCAGAGTCAGCATATATATGCAATGCATACATGAGAGAACAGACTACCACTAAGTCTAAGAGTGGGAGAAATTCCCATAAGCATGGGCGAGGTAAGAAGTCCTCTAGAAGAATGAATGGTTCTAAATGTGATACAAGGCATCAGAAGGTGAGCAGTGATGGCAATTTAAGTCGTGGACGATTTATGCATGGACAACAAGGTAGCCGGAGTCGCCGGACAGTTAGGAAAAGAACGTTGGAGGAACGGGCTGTTGAGGACTTGTTGCCACGTCAGACAACTGCGATACCAGTCTCCAAGGCTGATGCAGAACTATTGAGAAGCTTAGCTGTGGAAAGGGAAGGGGTAAAAAATAGTATGCAGATGGAGCTTGGTGACAATAGCAACAGCTCTGAAGAAGTTCAATCTGATGACAATGGTCAAGCAGTAGAATATGAGCAAAGCAACTGGGAGATAGGTTTCAGTGGTTCCTCGACAAGGTGGGAGAGGGGGTTGACAGAACCTAGTGATGAAGACATGGATGCTTCTGAAGATGAGAGAGATCACAATGCAGACTTTGTGAGTGAGAACTTGGATGAAATGACCAACCTTGGTGCTAATGATGAAGGCACGGAATCAGCAGTCTCTGAAGATTCTTATGAACAGAAGTCAGAACTATAG 5181 0.4183 MDSSDGENSRRDGSLEKDDDEIIGRNINNSKIVNSSEGQSKQKRQMKTPYQLEALEKAYALETYPTESTRAELSDKLGLTDRQLQMWFCHRRLRDKKDLPSKKQKKTPAAVLDSPADNLKPGPEFGNDYGSGSASGFSPIGRAGVSRGMARYRRSPPSILELRAVAFVEAQLDEPLRKDGPILGIEFDPLPPDAFGAPLEQQKRPGLADGAKLFDLHNVKPNKTSARALQEYQYFQNQPSIRSDICGQLPQSHLRDPILDGDIARTPSYMPVNELLPRVHTEKGHSSRVRHVSQQDKQQIACSSPARDDDYFRRRDSVAITANVGMNAHYNDHPVVKSESYGISAGQTYHIDTISNMNRKRKVEDTKISREVEAHEIKVRKELEKQDILRQKNEERMKKEIERQDRERRKEEERLVRERQREEERLKREEKRETERREKLLLKEHLRAEKIRQKEEIRKEKEAERRKVALEKATARRLAKESMELIEDEQLELMELAAAKKGVSSIIHLDLDALQNLESFRDSLCLFPLGSLKLKKPFAIQPWVNSDKNTSNLLMVWRFLIAFADVLGIWPFTLDEFIQAFHDYDSRLLGEIHVALLKVIIKDIEDVARTPTTVFGANQNGANLGGGHPEIVEGANAWGFDIQTWLQHLNPLTWPEILRQLALSAGFGPRLKKQSTGWQNTQAKDEVPNCEDTISTLRNGTAAEKAFAKMRERGLLAPPRSRHRLTPGTVKFAAFHVLSLEGSAGLNVLDLAEKIQKSGLRDLTSSKTPEASISVAMSRDAKLFERIAPSTYRVRDAYRKDPIDAEVILSEARKKIQMFENGIQPGEDVDDVERDEESESDGVDEDPEVDFLINSNVNEIDEHHGNTSTCLGNGKENLSNEIDLNTETGFEKDISFSVNGIENMDCLNTAIEPPVEDIPTKNLDQFGMEIDESISGESWIQGLTEGDYSVLSVEERLNALVVLIGVANEGHSVRVVLEDRLEAANALKKQMWAEAQLDKRCIKDDILNKLDTPSFSGNRIEPQYPVMEGTQSPLHNAIIRTNEESPRTLENQKLISTPQYVQNQLSLIPSEKGSFADINLGSDNFPSQQLGYASKRSRSQMKSYIAQKAEEVYIYRSLPLGQDRRHNRYWQFITSASSNDPGAGRIFVELQDHKWRLIDSQEDFDILLKSLDARGIRESHLLLMLQKIESTFKENVRISSHSAKYSWLDGDSVKNKANGIDSSPDEHAVFDSPSSIISRSNSDELETASSSFKVELGRYDTEKKAAVQRYQDFQKWMWKQCYSPSTLCATKYGKKRGRLLMEMCDVCFNSYYFERFHCPHCHRTTSITRSNSSKHACQCGEKKPDPHDTQISGASLPLQTRLLKSLLANIEVSVPLEAFHSIWKEEYRKEWGKRLSMSSSPKELLQILTLLERALQREYISPNFHTTEESLELCSMPACTAQNSIDLESVPVIPWIPQTIAALALRLLEFDASISYTQLEKHEPDENKEARGYTKLPSRYAAMKTEIKSESAYICNAYMREQTTTKSKSGRNSHKHGRGKKSSRRMNGSKCDTRHQKVSSDGNLSRGRFMHGQQGSRSRRTVRKRTLEERAVEDLLPRQTTAIPVSKADAELLRSLAVEREGVKNSMQMELGDNSNSSEEVQSDDNGQAVEYEQSNWEIGFSGSSTRWERGLTEPSDEDMDASEDERDHNADFVSENLDEMTNLGANDEGTESAVSEDSYEQKSEL* 1727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00845 1726 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Pte2g00845 1726 MobiDBLite consensus disorder prediction 399 430 - -
Pte2g00845 1726 ProSiteProfiles DDT domain profile. 547 606 IPR018501 -
Pte2g00845 1726 MobiDBLite consensus disorder prediction 1 49 - -
Pte2g00845 1726 MobiDBLite consensus disorder prediction 1628 1670 - -
Pte2g00845 1726 MobiDBLite consensus disorder prediction 27 47 - -
Pte2g00845 1726 MobiDBLite consensus disorder prediction 823 847 - -
Pte2g00845 1726 MobiDBLite consensus disorder prediction 829 847 - -
Pte2g00845 1726 MobiDBLite consensus disorder prediction 1523 1586 - -
Pte2g00845 1726 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 29 1719 IPR044977 GO:0006357
Pte2g00845 1726 MobiDBLite consensus disorder prediction 1545 1561 - -
Pte2g00845 1726 SMART testlast3 547 606 IPR018501 -
Pte2g00845 1726 SMART HOX_1 40 102 IPR001356 GO:0003677
Pte2g00845 1726 Coils Coil 389 474 - -
Pte2g00845 1726 MobiDBLite consensus disorder prediction 97 138 - -
Pte2g00845 1726 MobiDBLite consensus disorder prediction 1624 1726 - -
Pte2g00845 1726 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1116 1188 IPR028941 -
Pte2g00845 1726 Gene3D - 32 112 - -
Pte2g00845 1726 MobiDBLite consensus disorder prediction 1562 1576 - -
Pte2g00845 1726 ProSiteProfiles HARE-type HTH domain profile. 728 797 IPR007759 GO:0006355
Pte2g00845 1726 MobiDBLite consensus disorder prediction 1529 1544 - -
Pte2g00845 1726 SUPERFAMILY Homeodomain-like 31 97 IPR009057 -
Pte2g00845 1726 Pfam HB1, ASXL, restriction endonuclease HTH domain 728 796 IPR007759 GO:0006355
Pte2g00845 1726 CDD homeodomain 41 97 IPR001356 GO:0003677
Pte2g00845 1726 Pfam DDT domain 550 603 IPR018501 -
Pte2g00845 1726 MobiDBLite consensus disorder prediction 1 25 - -
Pte2g00845 1726 Pfam Homeodomain 41 97 IPR001356 GO:0003677
Pte2g00845 1726 MobiDBLite consensus disorder prediction 1696 1713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00845 Pte-Chr2 7549772 7560422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00845 34 1662 Homeobox Transcription Factor Family AT1G28420 47.734 0.0 1274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pte2g00845 WSD 7.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00845 - - qsa:O6P43_031877 1852.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00845 2 7549772 7560422 Pte2g00845 2 7549772 7560422 RCT