Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00844 ATGGGTGTAGACTATTATAAGATTTTGCAGGTTGACAAGAATGCGAAAGATGATGATTTGAAAAAAGCCTATAGAAAACTTGCCATGAAATGGCATCCAGATAAGAATCCCAACAACAAGAAAGAAGCTGAGGCCAAATTCAAACAGATTTCTGAAGCATATGAAGTTCTTAGTGATCCTCAGAAGAGAGCGATTTATGACCAGTACGGAGAAGAAGGTCTTAAAGGCAATGTCCCACCTCCAGATGCTGGTGGGGCATCATTCTTTCAAAGTGGAAATGGTTCAACAACTTTCAGATTTAACCCCAGAAATGCAGATGACATATTTGCTGAGTTTTTTGGGTTTTCGAGTCCATTTGCCGGGATGGGTGGTGGCAGTGGCATAAGGAGTAGTTCCAGATCGTTTGGTGGAATGTTTGGTGATGATATGTTCGGTACATTTGGGGAAGGCCGGCCAATGAGTCAAGCTCCAAGGAAGGCAGCACCAATTGAAAGCACTCTGCCTTGCAGCTTAGAGGAGCTGTACAAGGGTACTACCAAGAAGATGAAAATCTCCAGAGAAATTGCGGATGCTAGTGGAAAAACCTTACCTGTGGAAGAAATTCTAACTATTGAAATCAAACCTGGTTGGAAAAAAGGGACCAAGATCACATTCCCTGAGAAAGGAAATGAGCAGCCAAATGTTATTCCTGCAGATCTGGTGTTCATAATTGATGAGAAACCACACAGGACATTCACAAGGGATGGTAATGATTTGATTGTTACCCAGAAGATTTCACTTGCAGAGGCTCTGACGGGCTACACTGTCCATTTGACAAGTCTTGATGGAAGGAGTTTGACTATTCCCATAAACAATGTAATTCATCCAAATTATGAGGAGATCGTCCCAAAGGAAGGCATGCCAATACCAAAGGATCCTTCAAAGAAGGGCAATCTTAGAATCAAGTTTGATATCAAGTTCCCAACTCGGCTGTCATCTGAGCAGAAGGCTGGGATCAAAAAGCTCTTGGCACAGTAA 1017 0.4248 MGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPQKRAIYDQYGEEGLKGNVPPPDAGGASFFQSGNGSTTFRFNPRNADDIFAEFFGFSSPFAGMGGGSGIRSSSRSFGGMFGDDMFGTFGEGRPMSQAPRKAAPIESTLPCSLEELYKGTTKKMKISREIADASGKTLPVEEILTIEIKPGWKKGTKITFPEKGNEQPNVIPADLVFIIDEKPHRTFTRDGNDLIVTQKISLAEALTGYTVHLTSLDGRSLTIPINNVIHPNYEEIVPKEGMPIPKDPSKKGNLRIKFDIKFPTRLSSEQKAGIKKLLAQ* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00844 338 FunFam Dnaj homolog subfamily b member 159 240 - -
Pte2g00844 338 Pfam DnaJ domain 4 67 IPR001623 -
Pte2g00844 338 CDD DnaJ 4 59 IPR001623 -
Pte2g00844 338 Pfam DnaJ C terminal domain 163 321 IPR002939 -
Pte2g00844 338 Gene3D - 242 322 - -
Pte2g00844 338 FunFam DnaJ subfamily B member 13 242 322 - -
Pte2g00844 338 SUPERFAMILY Chaperone J-domain 3 99 IPR036869 -
Pte2g00844 338 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 336 - -
Pte2g00844 338 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Pte2g00844 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 157 248 IPR008971 GO:0006457|GO:0051082
Pte2g00844 338 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pte2g00844 338 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pte2g00844 338 PRINTS DnaJ domain signature 62 81 IPR001623 -
Pte2g00844 338 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pte2g00844 338 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pte2g00844 338 CDD DnaJ_C 161 324 - -
Pte2g00844 338 Gene3D - 162 240 - -
Pte2g00844 338 SMART dnaj_3 3 62 IPR001623 -
Pte2g00844 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 330 IPR008971 GO:0006457|GO:0051082
Pte2g00844 338 FunFam DnaJ subfamily B member 13 3 123 - -
Pte2g00844 338 Gene3D DnaJ domain 3 123 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00844 Pte-Chr2 7547283 7549592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00844 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 2.26e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00844 K09510 - qsa:O6P43_031876 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00844 2 7547283 7549592 Pte2g00844 2 7547283 7549592 RCT