Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00837 ATGGCGTCCTCTCCTTCATCTTGTGCTTCTCGTGAGGGTCACTACAGAGGTGTCAGGAAGAGGCCATGGGGTCGTTATGCAGCCGAGATACGGGACCCATGGAAGAAAACAAGAGTTTGGTTGGGCACATTCGACACACCTGAAGAAGCAGCTCTTGCCTATGATGGTGCTGCTCGTTCCCTGCGTGGACCCAAAGCCAAAACAAACTTCCCACCTGTCGACACTACTGGCGGATTCAACGCTCCGATAGCATATTCCCGCTGGCCTACTCTTCATCCTGCAGAAAGGTCCATGCTTGGCGAGTTTCTTCAAACAGGTGTTCTGAAAGAAAATGCCAATGGACATCCTCATCAGCCTTTTTTGGCGGTCCAGAATAGCTGTGAAGGGCCGTTCAATGCTGTTAGCAGCGGTCCGGCTGGCGGCTGTTCAGAGGTGCGGGAATGTCCGAGGACGACGTCGTTCCTGGGTATCATGCAGCGTGGGTTACCCATCGATCTGAATGAACCACCGCCGTTATGGCTATGA 525 0.5333 MASSPSSCASREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGPKAKTNFPPVDTTGGFNAPIAYSRWPTLHPAERSMLGEFLQTGVLKENANGHPHQPFLAVQNSCEGPFNAVSSGPAGGCSEVRECPRTTSFLGIMQRGLPIDLNEPPPLWL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00837 174 Gene3D AP2/ERF domain 14 72 IPR036955 GO:0003700|GO:0006355
Pte2g00837 174 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Pte2g00837 174 CDD AP2 14 73 IPR001471 GO:0003700|GO:0006355
Pte2g00837 174 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 107 - -
Pte2g00837 174 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Pte2g00837 174 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Pte2g00837 174 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Pte2g00837 174 SUPERFAMILY DNA-binding domain 14 71 IPR016177 GO:0003677
Pte2g00837 174 FunFam Ethylene-responsive transcription factor 2 14 72 - -
Pte2g00837 174 Pfam AP2 domain 14 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00837 Pte-Chr2 7464005 7464866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00837 6 175 AP2-EREBP Transcription Factor Family AT1G28360 48.223 4.80e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte2g00837 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00837 - - qsa:O6P43_012676 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00837 2 7464005 7464866 Pte2g00837 2 7464005 7464866 RCT