Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00834 ATGCCAGCAAAGATGAGCACACAAGAGACTCAATTAGAAGACGATCCTATTCAACTTGTTAATGATGATAACAACCATAACCAGCCAGAATATGTAGAGGAATCCGATCGAAGCCCATGGTGTAGTCACGGAGAAAAAGATGAATATGTTACCATAAGCTTGTCAGACGTACGCAAGGAAGTTCAATGTCCCATTTGCCTAGGGATCATCCGCAGAACAAGAACAGTTATGGAATGCTTGCATCGCTTCTGTAGAGAATGCATAGACAAATCTATGCGCCTCGGAAACAACGAATGCCCTGCTTGCCGCACGCATTGCGCTAGTCGGCGCTCTCTTAGGGATGATCCAAACTTTGATGCCTTAATTGCTGTACTCTATCCAGATATTGAGAAGTATGAGGAGGGGGAATTGGCTTTTCAAGAAGAGGAGAAAGCCCGTAATAAGCAGATCCAAGCTTCCATCGCTCAGACTATGCAAAAGCAAACAGAAGCCCTCAGTAAAAAACGTACAGCTAAAGCTACAGCAACCGTCCTTGTGAGAACATCTCAGTGTAACTACCGAAATACACATCTAAAGAGAAACAGAAATTCCCCTATCTTGGCTGATCTCCTTCAGAATTCTGATGACGTTGAGGATGCACATGGTGATGAGGGGGGAAAGGGCTCGTCTTCCGATGAGAGGACACAGACTGTGCCAAAAAGATGCAAGGGGCAGGGAGGATCACAATTTTGTCAACCCTATATGATTGCTGGTGTAGACAAGGTTGGTGATGAAAATGATCCCGAGTCAAACAAAGAACTCATAGGTGTAGTGCCTGGGCTTGTTTGCAGTTCTGATAGGCTTGCTTGGGGAAAAGGAGGCAACCGAAGCCGTGGCAATGGGAAGAATTCCAGAATTGGCCGCCTTCCAAAGTTGGTTGATCATCTTCATAACTCAGAAAAGAATGATGATGAGGCAATCAATTCTTTGACTTGTCTAATGAATATTCACCTTATGCTTGTCTCATGCGATAAGCAAAGAGTACCCAGTTTGAAGCGGCCATTCCTCTATTGCACACCTACTCTATCGATCAAACATCTATGTCAGTATGTGGCTATTCAAACAGCATTGCAGGGTGATGAAGTTGAGCTGTTGTTGGTGAAAGAGCCAGCAGCTAGTAATTGTTTTTTGTCATTTGAAGAAATTGTGACAGATCCAGGCATACACGAGTTGCAACCGTTGAGAGAAAAAGATACTTTAGCTGAACTCAAGATCCATAATCTAATCAACAGGCATCTGATTCTAGCTTACAAGAAGAAGCTCCGGAACTGA 1311 0.4386 MPAKMSTQETQLEDDPIQLVNDDNNHNQPEYVEESDRSPWCSHGEKDEYVTISLSDVRKEVQCPICLGIIRRTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDALIAVLYPDIEKYEEGELAFQEEEKARNKQIQASIAQTMQKQTEALSKKRTAKATATVLVRTSQCNYRNTHLKRNRNSPILADLLQNSDDVEDAHGDEGGKGSSSDERTQTVPKRCKGQGGSQFCQPYMIAGVDKVGDENDPESNKELIGVVPGLVCSSDRLAWGKGGNRSRGNGKNSRIGRLPKLVDHLHNSEKNDDEAINSLTCLMNIHLMLVSCDKQRVPSLKRPFLYCTPTLSIKHLCQYVAIQTALQGDEVELLLVKEPAASNCFLSFEEIVTDPGIHELQPLREKDTLAELKIHNLINRHLILAYKKKLRN* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00834 436 MobiDBLite consensus disorder prediction 1 37 - -
Pte2g00834 436 MobiDBLite consensus disorder prediction 209 232 - -
Pte2g00834 436 MobiDBLite consensus disorder prediction 1 26 - -
Pte2g00834 436 ProSiteProfiles Zinc finger RING-type profile. 63 103 IPR001841 -
Pte2g00834 436 MobiDBLite consensus disorder prediction 209 237 - -
Pte2g00834 436 PANTHER OS11G0578200 PROTEIN 21 434 IPR044592 -
Pte2g00834 436 Pfam Zinc finger, C3HC4 type (RING finger) 62 102 - -
Pte2g00834 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 126 IPR013083 -
Pte2g00834 436 SMART ring_2 63 102 IPR001841 -
Pte2g00834 436 ProSitePatterns Zinc finger RING-type signature. 79 88 IPR017907 -
Pte2g00834 436 CDD RING-HC_RING1-like 60 125 - -
Pte2g00834 436 SUPERFAMILY RING/U-box 48 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00834 Pte-Chr2 7436317 7441017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00834 61 182 C3H Transcription Factor Family AT2G30580 28.906 7.27e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00834 K10695 - zju:107425269 493.812