Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte2g00834 | ATGCCAGCAAAGATGAGCACACAAGAGACTCAATTAGAAGACGATCCTATTCAACTTGTTAATGATGATAACAACCATAACCAGCCAGAATATGTAGAGGAATCCGATCGAAGCCCATGGTGTAGTCACGGAGAAAAAGATGAATATGTTACCATAAGCTTGTCAGACGTACGCAAGGAAGTTCAATGTCCCATTTGCCTAGGGATCATCCGCAGAACAAGAACAGTTATGGAATGCTTGCATCGCTTCTGTAGAGAATGCATAGACAAATCTATGCGCCTCGGAAACAACGAATGCCCTGCTTGCCGCACGCATTGCGCTAGTCGGCGCTCTCTTAGGGATGATCCAAACTTTGATGCCTTAATTGCTGTACTCTATCCAGATATTGAGAAGTATGAGGAGGGGGAATTGGCTTTTCAAGAAGAGGAGAAAGCCCGTAATAAGCAGATCCAAGCTTCCATCGCTCAGACTATGCAAAAGCAAACAGAAGCCCTCAGTAAAAAACGTACAGCTAAAGCTACAGCAACCGTCCTTGTGAGAACATCTCAGTGTAACTACCGAAATACACATCTAAAGAGAAACAGAAATTCCCCTATCTTGGCTGATCTCCTTCAGAATTCTGATGACGTTGAGGATGCACATGGTGATGAGGGGGGAAAGGGCTCGTCTTCCGATGAGAGGACACAGACTGTGCCAAAAAGATGCAAGGGGCAGGGAGGATCACAATTTTGTCAACCCTATATGATTGCTGGTGTAGACAAGGTTGGTGATGAAAATGATCCCGAGTCAAACAAAGAACTCATAGGTGTAGTGCCTGGGCTTGTTTGCAGTTCTGATAGGCTTGCTTGGGGAAAAGGAGGCAACCGAAGCCGTGGCAATGGGAAGAATTCCAGAATTGGCCGCCTTCCAAAGTTGGTTGATCATCTTCATAACTCAGAAAAGAATGATGATGAGGCAATCAATTCTTTGACTTGTCTAATGAATATTCACCTTATGCTTGTCTCATGCGATAAGCAAAGAGTACCCAGTTTGAAGCGGCCATTCCTCTATTGCACACCTACTCTATCGATCAAACATCTATGTCAGTATGTGGCTATTCAAACAGCATTGCAGGGTGATGAAGTTGAGCTGTTGTTGGTGAAAGAGCCAGCAGCTAGTAATTGTTTTTTGTCATTTGAAGAAATTGTGACAGATCCAGGCATACACGAGTTGCAACCGTTGAGAGAAAAAGATACTTTAGCTGAACTCAAGATCCATAATCTAATCAACAGGCATCTGATTCTAGCTTACAAGAAGAAGCTCCGGAACTGA | 1311 | 0.4386 | MPAKMSTQETQLEDDPIQLVNDDNNHNQPEYVEESDRSPWCSHGEKDEYVTISLSDVRKEVQCPICLGIIRRTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDALIAVLYPDIEKYEEGELAFQEEEKARNKQIQASIAQTMQKQTEALSKKRTAKATATVLVRTSQCNYRNTHLKRNRNSPILADLLQNSDDVEDAHGDEGGKGSSSDERTQTVPKRCKGQGGSQFCQPYMIAGVDKVGDENDPESNKELIGVVPGLVCSSDRLAWGKGGNRSRGNGKNSRIGRLPKLVDHLHNSEKNDDEAINSLTCLMNIHLMLVSCDKQRVPSLKRPFLYCTPTLSIKHLCQYVAIQTALQGDEVELLLVKEPAASNCFLSFEEIVTDPGIHELQPLREKDTLAELKIHNLINRHLILAYKKKLRN* | 437 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte2g00834 | 436 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Pte2g00834 | 436 | MobiDBLite | consensus disorder prediction | 209 | 232 | - | - | |
Pte2g00834 | 436 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Pte2g00834 | 436 | ProSiteProfiles | Zinc finger RING-type profile. | 63 | 103 | IPR001841 | - | |
Pte2g00834 | 436 | MobiDBLite | consensus disorder prediction | 209 | 237 | - | - | |
Pte2g00834 | 436 | PANTHER | OS11G0578200 PROTEIN | 21 | 434 | IPR044592 | - | |
Pte2g00834 | 436 | Pfam | Zinc finger, C3HC4 type (RING finger) | 62 | 102 | - | - | |
Pte2g00834 | 436 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 57 | 126 | IPR013083 | - | |
Pte2g00834 | 436 | SMART | ring_2 | 63 | 102 | IPR001841 | - | |
Pte2g00834 | 436 | ProSitePatterns | Zinc finger RING-type signature. | 79 | 88 | IPR017907 | - | |
Pte2g00834 | 436 | CDD | RING-HC_RING1-like | 60 | 125 | - | - | |
Pte2g00834 | 436 | SUPERFAMILY | RING/U-box | 48 | 134 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte2g00834 | Pte-Chr2 | 7436317 | 7441017 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte2g00834 | 61 | 182 | C3H Transcription Factor Family | AT2G30580 | 28.906 | 7.27e-06 | 45.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte2g00834 | K10695 | - | zju:107425269 | 493.812 |