Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00830 ATGGATTCGAAACTCAAAGCCTGCTCAAGAGATGGGGATGAGAAGATAAGAGATGGGTTGGAAGAGAGGGTTGTTCAGGTGAGGAGGTTTACCAAGGTGGTGAAGGGAGGTCAGAATTTGAACTTTAGACCAGTCGTTGTTGTAGGTGATAAGAAAGGTCGAGTGGGTGTTGGTGTTGGCATCGCCAAGGAGGCTGTTTCTGCTGTTCAGAAGTCTGCTATTGATGCTAGGAGAAATATTATTACTGTTCCAATGACCAAACAGCCAAGGATGTCTCCGTCCAAGTCTGGAATGGCCATCACTCCATTGGTGCAAATTGGACACAAGGGACGGTTTGGCTTGCTTGATTTCCTAATTGTGGCTTTCTTGTCAGTAGCTTCAAGGATTTCCAAACTGGGGAATTGGCTTATGGCGTGGCTTGTTGAAATGGCAACGTGGCTAGTGTTAAAGTGTGAGGTTTGGAAACATGAGGTGGCTGGACAATTTGATGGCTTGGCTGGTGCGTGGTTGGTGCTTCAATGCTTGCAATGGCGTGGAGGGGTTGAGAATGCTTTGGGCAAGCAGTTTGGGATTAATAATGCCTTAAATAATGCTAGAGCTGTGATTGTTGCAGTTCAAGAGATGAAGCTATTTGAAGAAGCTGCCCAGGATCGTGGGATCCCCGTGGAACAACTATACAGACGAGAAACTTAA 693 0.4632 MDSKLKACSRDGDEKIRDGLEERVVQVRRFTKVVKGGQNLNFRPVVVVGDKKGRVGVGVGIAKEAVSAVQKSAIDARRNIITVPMTKQPRMSPSKSGMAITPLVQIGHKGRFGLLDFLIVAFLSVASRISKLGNWLMAWLVEMATWLVLKCEVWKHEVAGQFDGLAGAWLVLQCLQWRGGVENALGKQFGINNALNNARAVIVAVQEMKLFEEAAQDRGIPVEQLYRRET* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00830 230 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN S5 9 84 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pte2g00830 230 Pfam Ribosomal protein S5, N-terminal domain 20 84 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pte2g00830 230 ProSiteProfiles S5 double stranded RNA-binding domain profile. 20 83 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pte2g00830 230 Gene3D - 164 227 IPR014721 -
Pte2g00830 230 Gene3D - 13 81 - -
Pte2g00830 230 SUPERFAMILY dsRNA-binding domain-like 16 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00830 Pte-Chr2 7388009 7389812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00830 13 83 Cytoplasmic Ribosomal Protein Gene Family AT1G58380 32.394 6.71e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00830 K02988 - tcc:18596821 153.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00830 2 7388009 7389812 Pte2g00830 2 7388009 7389812 RCT