Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00824 ATGGAGAATAACCCTAGTTCTTCAAGGACGGATAGAAAAACAATTGAGAAGAACAGAAGAATTCGAATGAAGGCTCTCTACTCCGAGCTCAGTGCTTTAGTACCACATCAAAGCTCAGAGGAAGCCATACCATTACCAGTTCAGCTAGACGAAGCTACCAAGTACATCAAGAAGCTACAAATTGACTTGGAAAAGATGAGGGAAAAGAAACACAGCCTAATGGGAATTGGAAAACCAAGAAGCAGTGGAGCAACTATGAACGTCATGAGACCACCAAAGATTGTGATCCATACAATGGGTTCGGACTTAGAGGTTGAGTTGATAACCGATCATCTGGAGTGCCAGTTCATGTTTTATGAAACCATTCGCATTCTCCATGAAGGCGGAGCTGACATTGTTAATGCAAGTTTTGCAGTTGTCGAAGATACCGTTTTCCATACTGTACGTTCTACGATTGGAGGATCTGTGGAGGAAGTTGCAAGGATATCCGAGAGATTGAAGAACTTAGTCTGCAATTCTAGCTAG 525 0.4248 MENNPSSSRTDRKTIEKNRRIRMKALYSELSALVPHQSSEEAIPLPVQLDEATKYIKKLQIDLEKMREKKHSLMGIGKPRSSGATMNVMRPPKIVIHTMGSDLEVELITDHLECQFMFYETIRILHEGGADIVNASFAVVEDTVFHTVRSTIGGSVEEVARISERLKNLVCNSS* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00824 174 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Pte2g00824 174 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 7 170 - -
Pte2g00824 174 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 73 IPR036638 GO:0046983
Pte2g00824 174 Coils Coil 49 69 - -
Pte2g00824 174 Gene3D - 1 78 IPR036638 GO:0046983
Pte2g00824 174 Pfam Helix-loop-helix DNA-binding domain 9 60 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00824 3 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.703 3.52e-37 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte2g00824 HLH 9.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00824 - - qsa:O6P43_012657 203.371